Gene
| Gene Model ID | pfu_aug1.0_67051.1_49050 |
|---|---|
| Locus | scaffold67051.1 : 1 ... 3373 : + |
| To GenomeBrowser | scaffold67051.1:1..3373 |
| Genes list of scaffold | scaffold67051.1 |
| Synonym | pfu_aug2.0_110.1_00260 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_67051.1_49050.t1 | 5 | 1 | Kelch_3 | 1 | 21 | 2.3e-26 | 91.3 | 0.00024 | 0.52 | 10.5 |
| pfu_aug1.0_67051.1_49050.t1 | 3 | 1 | Kelch_5 | 11 | 40 | 9.5e-15 | 54.1 | 8.1e-06 | 0.017 | 15.0 |
| pfu_aug1.0_67051.1_49050.t1 | 4 | 1 | Kelch_4 | 13 | 55 | 1.4e-27 | 95.1 | 1.3e-15 | 2.7e-12 | 46.2 |
| pfu_aug1.0_67051.1_49050.t1 | 4 | 1 | Kelch_6 | 13 | 56 | 1.1e-22 | 79.1 | 2.2e-08 | 4.7e-05 | 23.3 |
| pfu_aug1.0_67051.1_49050.t1 | 4 | 1 | Kelch_1 | 13 | 55 | 1.8e-20 | 72.2 | 6.7e-12 | 1.4e-08 | 34.1 |
| pfu_aug1.0_67051.1_49050.t1 | 3 | 1 | Kelch_2 | 13 | 55 | 5.7e-11 | 41.7 | 1.4e-06 | 0.0031 | 17.2 |
| pfu_aug1.0_67051.1_49050.t1 | 5 | 2 | Kelch_3 | 25 | 56 | 2.3e-26 | 91.3 | 2.7e-08 | 5.7e-05 | 23.1 |
| pfu_aug1.0_67051.1_49050.t1 | 3 | 2 | Kelch_5 | 62 | 95 | 9.5e-15 | 54.1 | 2.6e-06 | 0.0055 | 16.6 |
| pfu_aug1.0_67051.1_49050.t1 | 4 | 2 | Kelch_4 | 63 | 110 | 1.4e-27 | 95.1 | 1.4e-09 | 2.9e-06 | 26.9 |
| pfu_aug1.0_67051.1_49050.t1 | 4 | 2 | Kelch_1 | 63 | 103 | 1.8e-20 | 72.2 | 6.8e-10 | 1.4e-06 | 27.6 |
| pfu_aug1.0_67051.1_49050.t1 | 3 | 2 | Kelch_2 | 63 | 102 | 5.7e-11 | 41.7 | 1.8e-06 | 0.0039 | 16.9 |
| pfu_aug1.0_67051.1_49050.t1 | 4 | 2 | Kelch_6 | 67 | 103 | 1.1e-22 | 79.1 | 4.1e-09 | 8.7e-06 | 25.6 |
| pfu_aug1.0_67051.1_49050.t1 | 5 | 3 | Kelch_3 | 73 | 110 | 2.3e-26 | 91.3 | 2.3e-09 | 4.8e-06 | 26.5 |
| pfu_aug1.0_67051.1_49050.t1 | 4 | 3 | Kelch_6 | 114 | 172 | 1.1e-22 | 79.1 | 3.2e-06 | 0.0069 | 16.5 |
| pfu_aug1.0_67051.1_49050.t1 | 4 | 3 | Kelch_1 | 115 | 162 | 1.8e-20 | 72.2 | 0.04 | 85.0 | 2.8 |
| pfu_aug1.0_67051.1_49050.t1 | 4 | 3 | Kelch_4 | 118 | 162 | 1.4e-27 | 95.1 | 0.11 | 230.0 | 1.6 |
| pfu_aug1.0_67051.1_49050.t1 | 5 | 4 | Kelch_3 | 121 | 179 | 2.3e-26 | 91.3 | 3.5e-06 | 0.0074 | 16.4 |
| pfu_aug1.0_67051.1_49050.t1 | 3 | 3 | Kelch_5 | 168 | 206 | 9.5e-15 | 54.1 | 4.9e-07 | 0.001 | 18.9 |
| pfu_aug1.0_67051.1_49050.t1 | 4 | 4 | Kelch_4 | 171 | 206 | 1.4e-27 | 95.1 | 4.2e-06 | 0.0089 | 15.7 |
| pfu_aug1.0_67051.1_49050.t1 | 4 | 4 | Kelch_6 | 172 | 203 | 1.1e-22 | 79.1 | 0.00028 | 0.58 | 10.4 |
| pfu_aug1.0_67051.1_49050.t1 | 4 | 4 | Kelch_1 | 177 | 204 | 1.8e-20 | 72.2 | 0.0063 | 13.0 | 5.3 |
| pfu_aug1.0_67051.1_49050.t1 | 3 | 3 | Kelch_2 | 177 | 201 | 5.7e-11 | 41.7 | 0.012 | 25.0 | 4.8 |
| pfu_aug1.0_67051.1_49050.t1 | 5 | 5 | Kelch_3 | 185 | 207 | 2.3e-26 | 91.3 | 0.00034 | 0.73 | 10.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_67051.1_49050.t1 | gi|355485212|gb|AES66415.1| | 4.00001e-40 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_67051.1_49050.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_67051.1_49050.t1 tgtggaacagagtggagggcaaaggagataagccgtctccgagaagctaccatgccatgacgtcatctggcaaaatgctg tatgtgtttggtggatgcggagccaagggcagaatgagcgatctttacgcctttgatacggaaacaatcacgtgggaaaa gtttcctcaaagcgaggctattgtcggaaggggaggggcggggcttgctttccacaatggaaacatctacgtagtgggtg gatttgttgggaaagaagtaaatgatgtacacacattcaacataacttccagaacctggactcagctcagttttaaaaag gatttgccgccaatcagcgtgttcggaattgctgttttgaaagatacgattgttgttataaatggtgagacggatccgtc cgatcaaggacatgctggggcaggtaaaatgtcaaacgtgtgttacgtacatgataccagcaaagaaacgaaaatatggg agaaactggaagtgggcggggacattccagagccaagggcgtggtttccagcttcagtggtaaacgagaagcaggtctta atttttggcgggaatgcagagtccaatgagagactgtctgacatttattcgttgacattggattga |
|
Protein
| Protein ID | pfu_aug1.0_67051.1_49050.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_67051.1_49050.t1 WNRVEGKGDKPSPRSYHAMTSSGKMLYVFGGCGAKGRMSDLYAFDTETITWEKFPQSEAIVGRGGAGLAFHNGNIYVVGG FVGKEVNDVHTFNITSRTWTQLSFKKDLPPISVFGIAVLKDTIVVINGETDPSDQGHAGAGKMSNVCYVHDTSKETKIWE KLEVGGDIPEPRAWFPASVVNEKQVLIFGGNAESNERLSDIYSLTLD |
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