Gene
| Gene Model ID | pfu_aug1.0_6710.1_09407 |
|---|---|
| Locus | scaffold6710.1 : 31456 ... 38855 : - |
| To GenomeBrowser | scaffold6710.1:31456..38855 |
| Genes list of scaffold | scaffold6710.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6710.1_09407.t1 | 2 | 1 | EF-hand_1 | 4 | 28 | 9.2e-16 | 55.8 | 3.0e-10 | 6.4e-07 | 28.2 |
| pfu_aug1.0_6710.1_09407.t1 | 2 | 1 | EF-hand_6 | 4 | 28 | 8.3e-14 | 50.1 | 2.3e-09 | 5.0e-06 | 25.9 |
| pfu_aug1.0_6710.1_09407.t1 | 1 | 1 | EF-hand_7 | 5 | 74 | 1.7e-15 | 56.8 | 1.2e-18 | 2.5e-15 | 56.3 |
| pfu_aug1.0_6710.1_09407.t1 | 2 | 1 | EF-hand_5 | 7 | 25 | 1.4e-14 | 52.6 | 4.3e-08 | 9.2e-05 | 21.6 |
| pfu_aug1.0_6710.1_09407.t1 | 2 | 1 | EF-hand_8 | 8 | 24 | 1.4e-08 | 34.1 | 2.7e-05 | 0.057 | 13.0 |
| pfu_aug1.0_6710.1_09407.t1 | 2 | 2 | EF-hand_8 | 16 | 73 | 1.4e-08 | 34.1 | 1.1e-09 | 2.3e-06 | 27.1 |
| pfu_aug1.0_6710.1_09407.t1 | 2 | 2 | EF-hand_1 | 52 | 75 | 9.2e-16 | 55.8 | 5.2e-10 | 1.1e-06 | 27.4 |
| pfu_aug1.0_6710.1_09407.t1 | 2 | 2 | EF-hand_6 | 52 | 74 | 8.3e-14 | 50.1 | 3.1e-08 | 6.6e-05 | 22.4 |
| pfu_aug1.0_6710.1_09407.t1 | 2 | 2 | EF-hand_5 | 53 | 74 | 1.4e-14 | 52.6 | 1.2e-10 | 2.6e-07 | 29.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6710.1_09407.t1 | gi|198431608|ref|XP_002130539.1| | PREDICTED: neuronal calcium sensor 1-like [Ciona intestinalis] | 5.0e-32 |
Transcript
| Transcript ID | pfu_aug1.0_6710.1_09407.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6710.1_09407.t1 atgctcgaccttgaaggggcctttagtttgtatgatcttgacaatgatggctacatcaccaaagaagagatggtgaatat tgttgacgctatatacagtatggtagggaacctcctggacctacccaaggatgaggacacacccatcaaacgggtggaga aaatatttgctcaaatggacacaaatagagatggtcgattgacgaaagatgaattccgggagggttccaagtgcgatcct tggattgtcgaggcattgtccacgccccataggtag |
|
Protein
| Protein ID | pfu_aug1.0_6710.1_09407.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6710.1_09407.t1 MLDLEGAFSLYDLDNDGYITKEEMVNIVDAIYSMVGNLLDLPKDEDTPIKRVEKIFAQMDTNRDGRLTKDEFREGSKCDP WIVEALSTPHR |
|