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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6721.1_09412
Locus scaffold6721.1 : 1 ... 15375 : -
To GenomeBrowser scaffold6721.1:1..15375
Genes list of scaffold scaffold6721.1
Synonym pfu_aug2.0_121.1_03661

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_6721.1_09412.t1 1 1 7tm_2 40 237 1.0e-10 41.1 2.9e-14 1.4e-10 40.6
pfu_aug1.0_6721.1_09412.t1 1 1 Dicty_CAR 44 198 2.0e-07 30.1 9.0e-11 4.5e-07 29.0

Transcript
Transcript IDpfu_aug1.0_6721.1_09412.t1
Definition-
>pfu_aug1.0_6721.1_09412.t1
atggcaactgtggaaactgaactaccggtgtcaacgtttctttatacaacagactcaactaacgttacgtcagtgccatc
atggataattccaaatacactgccgacttctgttctgatctgtaccgggatagcttcctcactatccattctcggagcgg
tgttaatttttgtgacgtactgtaccgttgaaagcgcaagaaatcagacgcgtcgtctccttatttacctgacgatatca
gattttctgataagtgctgggaacttgttaggaaccatacggtatgctttaagattcaataaagaaatcaccgaccggga
cattgttcgtaactgtaggcattccgatgagatctgcgtcattcagagctgcgtcaccacctttgcgtcacttgcgtcat
tcggatggacagttgtgattggtgtacaccttctgacatcattagtttaccagaggtccatgggtaaaaaaccgaggatt
atctctcatctgatctgctggggagttccaattaccataacaacgattgctgcattttggaacgtgttaggtgaggatta
tgccctgagtagtggaccgtggtgttggatacgtggctgtttgaggtcagacaatgacatcattatatggatgactgtca
ccggcaaaggatgggaaatccttacctacgtattagctgccaatttctatatctatctcaaattgttcatgtgcaaacag
cgcaggtcagccaatcggagaatcggttattatgaacagtccggaagttcctatctgcgcatgcgccttagagatgaaga
tgagatctatgtcttgcagtggttactgttgtacgtccttaggatctggggcacgctatatgacgaattccatgataagc
catttcttttttacaaaccgtccaaaacaccgaattcgactctggttttgacattttctgcatggctcaagtga

Protein
Protein IDpfu_aug1.0_6721.1_09412.t1
Definition-
>pfu_aug1.0_6721.1_09412.t1
MATVETELPVSTFLYTTDSTNVTSVPSWIIPNTLPTSVLICTGIASSLSILGAVLIFVTYCTVESARNQTRRLLIYLTIS
DFLISAGNLLGTIRYALRFNKEITDRDIVRNCRHSDEICVIQSCVTTFASLASFGWTVVIGVHLLTSLVYQRSMGKKPRI
ISHLICWGVPITITTIAAFWNVLGEDYALSSGPWCWIRGCLRSDNDIIIWMTVTGKGWEILTYVLAANFYIYLKLFMCKQ
RRSANRRIGYYEQSGSSYLRMRLRDEDEIYVLQWLLLYVLRIWGTLYDEFHDKPFLFYKPSKTPNSTLVLTFSAWLK

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