Gene
| Gene Model ID | pfu_aug1.0_67389.1_63686 |
|---|---|
| Locus | scaffold67389.1 : 1 ... 3788 : + |
| To GenomeBrowser | scaffold67389.1:1..3788 |
| Genes list of scaffold | scaffold67389.1 |
| Synonym | pfu_aug2.0_788.1_27777 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_67389.1_63686.t1 | 1 | 1 | Methyltransf_3 | 104 | 181 | 6.3e-17 | 61.3 | 5.1e-20 | 1.3e-16 | 60.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_67389.1_63686.t1 | gi|61806472|ref|NP_001013468.1| | uncharacterized protein LOC541322 [Danio rerio] | 6.0e-28 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_67389.1_63686.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_67389.1_63686.t1 tgggtcacgtggttggtcatgtgacctatgaactaatgggtcacgtgattggtcatgtggccagtgacgtcatgggtcat gtgattggtcatgtgaccagtgaagtgctggcgacctgtgacgtcatgggccacgttgttggtcatgtgacctgtgtcgt cataagtcacgtggttggtcatgctagagatgagtattgtgacaaaataacatcagcaccgagtgaggagttaaggaacc tcatagacgagacccacaaacatccatgggacaaggtccacgaggagggcaagactacatggaagataagccccgtcata atgtctggtaacttagaagttcaatttttaaagtccgttgttagcatggttaaggcgaagcgagtcctggagttaggtct gtttactggatgtgcggctttggccctggctgaagctttaccagatgatggcgttttgtattcctgtgaatttgaccctt acctggtggatctagctagaaatctgatagacaaatctcctcatgggaagaaggtgaaaatacaacatg |
|
Protein
| Protein ID | pfu_aug1.0_67389.1_63686.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_67389.1_63686.t1 GHVVGHVTYELMGHVIGHVASDVMGHVIGHVTSEVLATCDVMGHVVGHVTCVVISHVVGHARDEYCDKITSAPSEELRNL IDETHKHPWDKVHEEGKTTWKISPVIMSGNLEVQFLKSVVSMVKAKRVLELGLFTGCAALALAEALPDDGVLYSCEFDPY LVDLARNLIDKSPHGKKVKIQH |
|