Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_674.1_07624
Locus scaffold674.1 : 15156 ... 27455 : +
To GenomeBrowser scaffold674.1:15156..27455
Genes list of scaffold scaffold674.1
Synonym pfu_aug2.0_51.1_03525

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_674.1_07624.t1 1 1 Sulfotransfer_1 58 308 0.0 156.8 0.0 4.2039e-45 153.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_674.1_07624.t1 gi|327281065|ref|XP_003225270.1| PREDICTED: sulfotransferase 1A1-like [Anolis carolinensis] 4.0e-34

Transcript
Transcript IDpfu_aug1.0_674.1_07624.t1
Definition-
>pfu_aug1.0_674.1_07624.t1
atgagtgaggagtcatatataagagagggtagatttcagcgtaaggatggggaaatagagtttgactttgtaacattaga
tggaataggactacccccctttccagcagcttatcagcctggaggtttcccgaagagaataaaagagatacaaaatcttg
actgccgtgctgatgacataattctcgcaacttatcccaaatgtggtactcactggaccaatgaaatccttcagatgctg
gtaaaaggcgatgcaaactataccaaggaatcaaaaatgtttttcatgctcgaagcgctagatgatttgaacagcataaa
ggatttcaagtctcctcgagtacttaatctccattttccatacaaatggtttcctaggaaacacatcgaaaatggcggga
aaattgtccacaccacaagaaatcctaaagatgcatatgtttcattatttcatcatgctaggagttctttagaacatgga
gtgaaaaccaaaaacatgacctgggatcaattctttaatacttgtgtacttgggaaaaatagcgcttatggttcttggtt
cgactttgaaaaagagattgaacaggccaagaaagtaaacaacaatatatacacgattcactttgaacaattaaaagagg
atccagagaaagtgataaaggacttggctatgtttctagatattccggcttcagactctctgatcaaagatattgctgaa
aagtgtttgtttcaaaacatgaaaaaggcggacaaggatatgaaagagttgccaaaaactatagaagaatacaaaagcag
tcataaagatttcgagtttccagttatgtatagaaaaggaattgtgggcgactggaagaaccatttcaccgtctcccaaa
atgaacaatttgatgccatgtttgaaaaggaaatgaatggaaccgatgtcaaagtattatacaactag

Protein
Protein IDpfu_aug1.0_674.1_07624.t1
Definition-
>pfu_aug1.0_674.1_07624.t1
MSEESYIREGRFQRKDGEIEFDFVTLDGIGLPPFPAAYQPGGFPKRIKEIQNLDCRADDIILATYPKCGTHWTNEILQML
VKGDANYTKESKMFFMLEALDDLNSIKDFKSPRVLNLHFPYKWFPRKHIENGGKIVHTTRNPKDAYVSLFHHARSSLEHG
VKTKNMTWDQFFNTCVLGKNSAYGSWFDFEKEIEQAKKVNNNIYTIHFEQLKEDPEKVIKDLAMFLDIPASDSLIKDIAE
KCLFQNMKKADKDMKELPKTIEEYKSSHKDFEFPVMYRKGIVGDWKNHFTVSQNEQFDAMFEKEMNGTDVKVLYN

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495