Gene
| Gene Model ID | pfu_aug1.0_674.1_07625 |
|---|---|
| Locus | scaffold674.1 : 27494 ... 34565 : - |
| To GenomeBrowser | scaffold674.1:27494..34565 |
| Genes list of scaffold | scaffold674.1 |
| Synonym | pfu_aug2.0_51.1_03524 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_674.1_07625.t1 | 1 | 1 | Flavodoxin_2 | 4 | 213 | 0.0 | 174.9 | 0.0 | 0.0 | 174.6 |
| pfu_aug1.0_674.1_07625.t1 | 1 | 1 | FMN_red | 7 | 153 | 1.5e-09 | 37.5 | 5.6e-13 | 2.8e-09 | 36.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_674.1_07625.t1 | gi|291409431|ref|XP_002721012.1| | PREDICTED: ribosyldihydronicotinamide dehydrogenase [quinone] [Oryctolagus cuniculus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_674.1_07625.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_674.1_07625.t1 atggcggccaagaatgtattgatcgtgttcgcccatcaggatccatacaaatcatttaatggcgctctcaaagacgaagc agtgaaaattctacaagagggaggacataaagtagaggtttctgacctatatgaccagaaatgggatcccagagccacaa aaaacgacttcacagggtctccccaaaacgaggaatccttcagttatgttgtagaacaggcacatgctgtcgcacaaggt aaactgacagaggacattgtgtccgagcaagagaagttaaagacagctgatctggttattttccagttccctatgtattg gttttccgttccagctatacttaaaggatggtttgacaaggtttttgcaggaggtgtaacacatgcatatccagccaacg tgtatgaaaacggatttatgaagggaaagaaagcgttgttgtcatttactacgggaggacctcagtccatgtacacatca gaaggttatcatggagatattaatatgatactatatccaattcattggggtacccttaagtttgttgggttcgacgtact aaaacccaatatagccttctgtcctagcttcagcagcgagaaagatcgaaagacaatgattgaagattggaaatcaagat tacaaacaatatttaatgaggaatcgattcaggtgaaaggaaaattatag |
|
Protein
| Protein ID | pfu_aug1.0_674.1_07625.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_674.1_07625.t1 MAAKNVLIVFAHQDPYKSFNGALKDEAVKILQEGGHKVEVSDLYDQKWDPRATKNDFTGSPQNEESFSYVVEQAHAVAQG KLTEDIVSEQEKLKTADLVIFQFPMYWFSVPAILKGWFDKVFAGGVTHAYPANVYENGFMKGKKALLSFTTGGPQSMYTS EGYHGDINMILYPIHWGTLKFVGFDVLKPNIAFCPSFSSEKDRKTMIEDWKSRLQTIFNEESIQVKGKL |
|