Gene
| Gene Model ID | pfu_aug1.0_6740.1_31272 |
|---|---|
| Locus | scaffold6740.1 : 4136 ... 15617 : + |
| To GenomeBrowser | scaffold6740.1:4136..15617 |
| Genes list of scaffold | scaffold6740.1 |
| Synonym | pfu_aug2.0_42.1_06804 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6740.1_31272.t1 | 1 | 1 | Y_phosphatase | 44 | 274 | 0.0 | 206.1 | 0.0 | 0.0 | 205.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6740.1_31272.t1 | gi|307171753|gb|EFN63464.1| | Receptor-type tyrosine-protein phosphatase beta [Camponotus floridanus] | 3.0e-33 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6740.1_31272.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6740.1_31272.t1 atgccacgttctcactacgttcatgaaaattttcaaggacttcaaggacgtagtaagaacgtctcgagagaacgtgacct gacgtctttatcggtatctgtcccctgtaccaaagcaagccatgtaataaatcgccataaaaacagatctccaagtatta taccaagtgattcaaagcgactgaaacttggtgaaaagagtgacacaactgaggactacattaatgcttctttaattcag attccattgatgtcagatcagtttgactgtatagccacacaacatccgttaccagagactacttcagatttctggcaaat ggtctgggaacgcaacgtatctttcattatcatgctcaactcagtttctgaatgcgagagtgtgcagtactggccgatcg aagaaggtggctccaagtcttatggtgctttctctgttaaagttgttgcctgcttttcctacggggataaaagcgtacat cgaatgttcgaagtttcaaagggcaagaaagtgaagaatatcaagcagttacattttgaaaattggagaacattttcaaa acgagacgtaaatccaatgcttgacttcctagaaactatggaaactaatattgaaaaatccaaaactcgaacaagcactg ttatacattgcagtgacggatctggaaggacaggtatttacatttgtgtgcatattcttgtatctttgataaaaagaggc gcatccaaagttgatgtatttgatacagctcatcgtctcctccaatcccggaaaaacataattgagacagaggagcaata ccatttcatctacgaatgtctcggtaccttcatcaccaaaagatcaaagggtggtggttccatgcctcgccagtctatcc aatacaacagtatacagcggtatgcgactgctaatgacaaggatgtttatgaacagttaccctag |
|
Protein
| Protein ID | pfu_aug1.0_6740.1_31272.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6740.1_31272.t1 MPRSHYVHENFQGLQGRSKNVSRERDLTSLSVSVPCTKASHVINRHKNRSPSIIPSDSKRLKLGEKSDTTEDYINASLIQ IPLMSDQFDCIATQHPLPETTSDFWQMVWERNVSFIIMLNSVSECESVQYWPIEEGGSKSYGAFSVKVVACFSYGDKSVH RMFEVSKGKKVKNIKQLHFENWRTFSKRDVNPMLDFLETMETNIEKSKTRTSTVIHCSDGSGRTGIYICVHILVSLIKRG ASKVDVFDTAHRLLQSRKNIIETEEQYHFIYECLGTFITKRSKGGGSMPRQSIQYNSIQRYATANDKDVYEQLP |
|