Gene
| Gene Model ID | pfu_aug1.0_6762.1_60098 |
|---|---|
| Locus | scaffold6762.1 : 23286 ... 31879 : + |
| To GenomeBrowser | scaffold6762.1:23286..31879 |
| Genes list of scaffold | scaffold6762.1 |
| Synonym | pfu_aug2.0_7871.1_06315 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | Pfu-002138-2 |
| Description | NCBI blastx best hit to AAZ76260.1. |
| mRNA evidence |
| Study field | Biomineralization |
|---|---|
| Gene name | 002138-1 |
| Description | calcium binding |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6762.1_60098.t1 | 1 | 1 | EF-hand_7 | 148 | 199 | 1.0e-06 | 28.7 | 6.1e-10 | 1.8e-06 | 27.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6762.1_60098.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6762.1_60098.t1 atgatctcggtgcgaaacgtcttcgctataattcaagactcgaaactagacacgctcgcgatggcggagttaccgattaa ttgttatgtcaacattcctcgacaggagtcagaagccgaagaaaaaaagatgaattttaaactggtcttactgatgtgca taataatgattgtgttgacggacgcatggttttggaggaggagaagacgtagatctagtcgtggtcatatcagaggatcg tttggttgtcccgggggtagatgttctggtactataagtggtcatagaacatggaataatggcagaacctccctgggagg acacattacttgtggaggtgggggatgtggagctggagtcagatttattcacaggttcaaaaaggaggctctgagagacg aaaacaaatttattattaccctaactttgcctgcatgtgattttcacccctatgatctgaacacaagtaaaacaattgag aaaagggagctgaggttctggttcagacaagatgatccagctctggtagactcactgttcaagtctctggacgaagacgg taatggctcagtctccatgacggaatttgccaatatggcgcctaaagtaataaagggttgcgacggccggagtggaggca aagttggtcagcgaggagacaaaggtccaaaatag |
|
Protein
| Protein ID | pfu_aug1.0_6762.1_60098.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6762.1_60098.t1 MISVRNVFAIIQDSKLDTLAMAELPINCYVNIPRQESEAEEKKMNFKLVLLMCIIMIVLTDAWFWRRRRRRSSRGHIRGS FGCPGGRCSGTISGHRTWNNGRTSLGGHITCGGGGCGAGVRFIHRFKKEALRDENKFIITLTLPACDFHPYDLNTSKTIE KRELRFWFRQDDPALVDSLFKSLDEDGNGSVSMTEFANMAPKVIKGCDGRSGGKVGQRGDKGPK |
|