Gene
| Gene Model ID | pfu_aug1.0_6765.1_45513 |
|---|---|
| Locus | scaffold6765.1 : 24456 ... 31617 : + |
| To GenomeBrowser | scaffold6765.1:24456..31617 |
| Genes list of scaffold | scaffold6765.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6765.1_45513.t1 | 2 | 1 | 7tm_1 | 45 | 245 | 2.4e-08 | 33.4 | 8.1e-12 | 3.0e-08 | 33.1 |
| pfu_aug1.0_6765.1_45513.t1 | 1 | 1 | 7TM_GPCR_Srsx | 79 | 265 | 8.0e-06 | 25.1 | 7.9e-09 | 2.9e-05 | 23.3 |
| pfu_aug1.0_6765.1_45513.t1 | 2 | 2 | 7tm_1 | 245 | 281 | 2.4e-08 | 33.4 | 0.073 | 270.0 | 0.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_6765.1_45513.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6765.1_45513.t1 atgctttgttacgatccaatcaagttggccacgtctactaagttctatcaaggcccactacgaccaccgagaaaaggaaa cacaaaaaaagctgcaaaaaagggtttagcttcttgtgtgaccatgcgcaccgtgccaggaatcgccgccgtatttatca ttgttgtcaacaaggataccgacagtctgattatccgatgctgtaacgcatgcgctcgttttggagggcagaccggttta ctcatgatgagtgcaatgggcatcgacagacttttatcactccagtttaacatccgttaccatttatatgttacacgacg aagaataaagatctatgctttcataatgtacgtcttgggctgtctgtccgtccttgcaagcttcattggagagcaaaaca gctgccattttttccgatcactgaatacaactctttaccaaggatgggtgtcagtcattattttttcaatcttcaccaca ctgaacgtgttcgtttacgcattcgttggaatagttgctcaccaaaagaggagaactagagcatcaaatactaatttccg aaggaatgattactccagatttttcaagcttactctgaaatcgttttcatttgtgcttttgtatctgtttttgatgcttc ctgtctccgtttatcagtttttcctgcttgctgcggatgacggaagtttccagctacctgccacagcccatcgtttaatc agcagactgactctcatattttttataatgttaccatgtgtttttgttgcaaactacaaagagagtcgttatcggtttct acgattaatgtgtttttgtaacatacgttacaaggacaaactggtcactgaatttaaacagagatatgcttcctatgaaa tatacacagtgaaaaatagaatgagcacagaagtttga |
|
Protein
| Protein ID | pfu_aug1.0_6765.1_45513.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6765.1_45513.t1 MLCYDPIKLATSTKFYQGPLRPPRKGNTKKAAKKGLASCVTMRTVPGIAAVFIIVVNKDTDSLIIRCCNACARFGGQTGL LMMSAMGIDRLLSLQFNIRYHLYVTRRRIKIYAFIMYVLGCLSVLASFIGEQNSCHFFRSLNTTLYQGWVSVIIFSIFTT LNVFVYAFVGIVAHQKRRTRASNTNFRRNDYSRFFKLTLKSFSFVLLYLFLMLPVSVYQFFLLAADDGSFQLPATAHRLI SRLTLIFFIMLPCVFVANYKESRYRFLRLMCFCNIRYKDKLVTEFKQRYASYEIYTVKNRMSTEV |
|