Gene
Gene Model ID | pfu_aug1.0_678.1_36650 |
---|---|
Locus | scaffold678.1 : 56926 ... 62915 : - |
To GenomeBrowser | scaffold678.1:56926..62915 |
Genes list of scaffold | scaffold678.1 |
Synonym | pfu_aug2.0_470.1_00785 |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | PFMG4 A |
Description | gb|AAZ76258.1| |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_678.1_36650.t1 | 1 | 1 | C1q | 30 | 156 | 1.2e-21 | 77.0 | 5.0e-25 | 1.5e-21 | 76.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
>Adult tissues | |
mantlePallium | 1 |
Transcript
Transcript ID | pfu_aug1.0_678.1_36650.t1 |
---|---|
Definition | - |
>pfu_aug1.0_678.1_36650.t1 atgtttcgtatagaaataattgtgatgctgacagtgatggccgtaacaatcaggggacagatatgtagtaatcaagagaa agtttacttccaagcttggaattctgcaactatgaagaacatcaaaagtggtcatgtcttcgtcttcgatagaacaaaca caaatcatggaaatcactatgacagttccaaggggaactttaaagctcctagagacggcccgtacgtctttacatggact gtcgttacccaggaccaatacagtataaatgttgaactgttcaggaataacaaaagagtaagtcttgcacaagcagatgg tcagcccggaccacaaaatagttccggatccaacacggttgtgctggatcttaagacaggtgacgtggtggatcttagat gtggtgattggatgaaccaggatcagcgacagcttgttggcgatacacactctacattttccggatgggcactatga |
Protein
Protein ID | pfu_aug1.0_678.1_36650.t1 |
---|---|
Definition | - |
>pfu_aug1.0_678.1_36650.t1 MFRIEIIVMLTVMAVTIRGQICSNQEKVYFQAWNSATMKNIKSGHVFVFDRTNTNHGNHYDSSKGNFKAPRDGPYVFTWT VVTQDQYSINVELFRNNKRVSLAQADGQPGPQNSSGSNTVVLDLKTGDVVDLRCGDWMNQDQRQLVGDTHSTFSGWAL |