Gene
| Gene Model ID | pfu_aug1.0_6789.1_60105 |
|---|---|
| Locus | scaffold6789.1 : 8842 ... 11975 : - |
| To GenomeBrowser | scaffold6789.1:8842..11975 |
| Genes list of scaffold | scaffold6789.1 |
| Synonym | pfu_aug2.0_1015.1_18023 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6789.1_60105.t1 | 2 | 1 | Neur_chan_memb | 50 | 135 | 2.3e-09 | 37.5 | 1.5e-13 | 2.3e-09 | 37.5 |
| pfu_aug1.0_6789.1_60105.t1 | 2 | 2 | Neur_chan_memb | 204 | 214 | 2.3e-09 | 37.5 | 0.13 | 2000.0 | -1.6 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_6789.1_60105.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6789.1_60105.t1 atggatttgtacatggagagcggcctttgggagataatcaacaccagtgtcacaacaatggaggttcccattgaagcaga cactttccaacttctagttctttcgttctccttgaagcgcagagcattattttaccttatgaacatgattcttcctatag cagtgatgggagggctgaatttgtttgtttttattttaccacaagaatcaggagagcgtataggatactcaatcacactc ttgttagctatatgtgtatatttgaccattgcgtcagacaatcttccccagtcgtcattcccgtccgtgtccttactgtg cgccaagctattctttgacatgattataagcagtttcgtcttgctgtttaccatacttggattgagatgttaccacactg acgatggtgttcgggttccatcatgtctcgtcttactcaccaaatgtgttctctgtaagtgctgcattactagagaacgc gtggaagaaccatacgtggtggaacacgaacacgagaaagaacgaaataatacttcaaataggaatcaaactgacatcaa caaaaatgagagaagagtgacatggactgatgtagggaaagctagcgatgtagtgtttttctgtataacgtttctggctt tcacatcgtctcatttggcttattatcttttcctgaaatttacataa |
|
Protein
| Protein ID | pfu_aug1.0_6789.1_60105.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6789.1_60105.t1 MDLYMESGLWEIINTSVTTMEVPIEADTFQLLVLSFSLKRRALFYLMNMILPIAVMGGLNLFVFILPQESGERIGYSITL LLAICVYLTIASDNLPQSSFPSVSLLCAKLFFDMIISSFVLLFTILGLRCYHTDDGVRVPSCLVLLTKCVLCKCCITRER VEEPYVVEHEHEKERNNTSNRNQTDINKNERRVTWTDVGKASDVVFFCITFLAFTSSHLAYYLFLKFT |
|