Gene
| Gene Model ID | pfu_aug1.0_68.1_00116 |
|---|---|
| Locus | scaffold68.1 : 2817 ... 8215 : - |
| To GenomeBrowser | scaffold68.1:2817..8215 |
| Genes list of scaffold | scaffold68.1 |
| Synonym | pfu_aug2.0_28.1_26678 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_68.1_00116.t1 | 1 | 1 | HMG_box | 200 | 268 | 2.6e-24 | 85.2 | 6.0e-28 | 4.4e-24 | 84.5 |
| pfu_aug1.0_68.1_00116.t1 | 1 | 1 | HMG_box_2 | 201 | 252 | 2.2e-08 | 34.3 | 6.0e-12 | 4.4e-08 | 33.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_68.1_00116.t1 | gi|241853676|ref|XP_002415916.1| | sox13, putative [Ixodes scapularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_68.1_00116.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_68.1_00116.t1 atggatacaagacattctatttcaccaccctccattataccgccgtatcatgcttcaccaagatctcttccgtcacctag caaccagcgacgaagcccaccaacggcaacggcagctaactggaccgctaccaatggcaacggcacagaagatattccac tcaacttgaccaaacctagggatataaaatcagagaaattagatgatgcctttgtcgccaaaatgacaggcaggatcgac aggaacaaaacaccgcctcctgcgcacagcaacataaaacgtggttcctcatcaccacctagtgatgtcacgagtctacc gggagctggtgtgcgcatgccctggggtcttcctcattacgtcacgagtcctttcatgatgaccaatcctctacaggtat cctccatgctcagtagtatgccctcagtcctcagtggaaagacgccctcagatctagataaggaggcaatggtacaagaa gcgttagctcgtcaactgtctcacagcggaatgactggccccgtatttcccggtaaaatgtttggtgccaaaataatacg gtctcagaaagagaagaacgaagccgggaaacctcatatcaagcgtccaatgaatgcctttatggtatgggcacgggaag agagaagaaagatactcaaagcatgtcctgacatgcacaactctaacattagcaagattctaggagcaaaatggaaagcc atgacaaatgccgagaagcagccatattacgaagaacagtctcgccttagcaagcttcacatggaaaagcaccccgacta cagatataggccaagaccaaaaagaacttgcattgtagatgggaaaaagcttagaatttccgaatataaatctttgatga gggcacgtagacaagatatccgcagggtgtggtacggggactcgggtaccacgtatgtggaaggattactaggtgagaat tctacagcgtcaagccctgacaatgtgcggcagaaattatctcccagtgcgtgtatgaatggctcctcacacagtcccct ccacccaggtggtttgaatggcatgtcacacggacttgatgacgaccacaatatgaatgatctcagtgacgatggtgatt tgagtgatcatatgtccgaggaaagtcttgatgcttcatcgtatagacccacatctaacggacagatagggctatcacaa gccgcttcatag |
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Protein
| Protein ID | pfu_aug1.0_68.1_00116.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_68.1_00116.t1 MDTRHSISPPSIIPPYHASPRSLPSPSNQRRSPPTATAANWTATNGNGTEDIPLNLTKPRDIKSEKLDDAFVAKMTGRID RNKTPPPAHSNIKRGSSSPPSDVTSLPGAGVRMPWGLPHYVTSPFMMTNPLQVSSMLSSMPSVLSGKTPSDLDKEAMVQE ALARQLSHSGMTGPVFPGKMFGAKIIRSQKEKNEAGKPHIKRPMNAFMVWAREERRKILKACPDMHNSNISKILGAKWKA MTNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKLRISEYKSLMRARRQDIRRVWYGDSGTTYVEGLLGEN STASSPDNVRQKLSPSACMNGSSHSPLHPGGLNGMSHGLDDDHNMNDLSDDGDLSDHMSEESLDASSYRPTSNGQIGLSQ AAS |
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