Gene
| Gene Model ID | pfu_aug1.0_6803.1_24088 |
|---|---|
| Locus | scaffold6803.1 : 11925 ... 24565 : - |
| To GenomeBrowser | scaffold6803.1:11925..24565 |
| Genes list of scaffold | scaffold6803.1 |
| Synonym | pfu_aug2.0_54.1_13501 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6803.1_24088.t1 | 2 | 1 | BTB | 41 | 145 | 4.2e-24 | 84.6 | 2.7e-26 | 4.4e-23 | 81.3 |
| pfu_aug1.0_6803.1_24088.t1 | 2 | 1 | BACK | 123 | 158 | 1.5e-17 | 63.2 | 0.94 | 1500.0 | -1.0 |
| pfu_aug1.0_6803.1_24088.t1 | 2 | 2 | BTB | 150 | 176 | 4.2e-24 | 84.6 | 0.26 | 420.0 | 0.9 |
| pfu_aug1.0_6803.1_24088.t1 | 2 | 2 | BACK | 156 | 251 | 1.5e-17 | 63.2 | 2.9e-20 | 4.8e-17 | 61.6 |
| pfu_aug1.0_6803.1_24088.t1 | 5 | 1 | Kelch_1 | 359 | 370 | 3.2e-25 | 87.3 | 0.68 | 1100.0 | -0.8 |
| pfu_aug1.0_6803.1_24088.t1 | 5 | 2 | Kelch_1 | 384 | 429 | 3.2e-25 | 87.3 | 3.3e-13 | 5.4e-10 | 38.6 |
| pfu_aug1.0_6803.1_24088.t1 | 4 | 1 | Kelch_6 | 384 | 429 | 7.9e-24 | 82.7 | 1.6e-10 | 2.6e-07 | 30.5 |
| pfu_aug1.0_6803.1_24088.t1 | 4 | 1 | Kelch_2 | 384 | 429 | 1.5e-10 | 40.3 | 0.00046 | 0.76 | 9.6 |
| pfu_aug1.0_6803.1_24088.t1 | 3 | 1 | Kelch_5 | 384 | 420 | 4.0e-10 | 39.4 | 0.00016 | 0.27 | 11.2 |
| pfu_aug1.0_6803.1_24088.t1 | 3 | 1 | Kelch_4 | 393 | 429 | 1.0e-12 | 47.6 | 6.5e-10 | 1.1e-06 | 28.3 |
| pfu_aug1.0_6803.1_24088.t1 | 4 | 1 | Kelch_3 | 394 | 434 | 9.7e-09 | 35.1 | 8.8e-07 | 0.0015 | 18.6 |
| pfu_aug1.0_6803.1_24088.t1 | 3 | 2 | Kelch_5 | 428 | 457 | 4.0e-10 | 39.4 | 4.7e-05 | 0.077 | 12.9 |
| pfu_aug1.0_6803.1_24088.t1 | 5 | 3 | Kelch_1 | 432 | 477 | 3.2e-25 | 87.3 | 4.6e-07 | 0.00075 | 18.9 |
| pfu_aug1.0_6803.1_24088.t1 | 4 | 2 | Kelch_6 | 433 | 481 | 7.9e-24 | 82.7 | 1.4e-07 | 0.00023 | 21.1 |
| pfu_aug1.0_6803.1_24088.t1 | 4 | 2 | Kelch_2 | 436 | 475 | 1.5e-10 | 40.3 | 9.3e-05 | 0.15 | 11.8 |
| pfu_aug1.0_6803.1_24088.t1 | 3 | 2 | Kelch_4 | 439 | 470 | 1.0e-12 | 47.6 | 0.012 | 20.0 | 5.0 |
| pfu_aug1.0_6803.1_24088.t1 | 4 | 2 | Kelch_3 | 441 | 485 | 9.7e-09 | 35.1 | 0.0026 | 4.3 | 7.6 |
| pfu_aug1.0_6803.1_24088.t1 | 5 | 4 | Kelch_1 | 480 | 527 | 3.2e-25 | 87.3 | 4.4e-08 | 7.3e-05 | 22.2 |
| pfu_aug1.0_6803.1_24088.t1 | 3 | 3 | Kelch_4 | 480 | 523 | 1.0e-12 | 47.6 | 9.7e-05 | 0.16 | 11.7 |
| pfu_aug1.0_6803.1_24088.t1 | 4 | 3 | Kelch_6 | 481 | 527 | 7.9e-24 | 82.7 | 4.3e-08 | 7.2e-05 | 22.7 |
| pfu_aug1.0_6803.1_24088.t1 | 3 | 3 | Kelch_5 | 484 | 500 | 4.0e-10 | 39.4 | 9.1e-05 | 0.15 | 12.0 |
| pfu_aug1.0_6803.1_24088.t1 | 4 | 3 | Kelch_2 | 487 | 523 | 1.5e-10 | 40.3 | 5.3e-05 | 0.087 | 12.6 |
| pfu_aug1.0_6803.1_24088.t1 | 4 | 3 | Kelch_3 | 490 | 499 | 9.7e-09 | 35.1 | 0.098 | 160.0 | 2.6 |
| pfu_aug1.0_6803.1_24088.t1 | 4 | 4 | Kelch_2 | 543 | 570 | 1.5e-10 | 40.3 | 0.92 | 1500.0 | -0.9 |
| pfu_aug1.0_6803.1_24088.t1 | 4 | 4 | Kelch_3 | 556 | 575 | 9.7e-09 | 35.1 | 0.12 | 200.0 | 2.2 |
| pfu_aug1.0_6803.1_24088.t1 | 5 | 5 | Kelch_1 | 558 | 572 | 3.2e-25 | 87.3 | 0.053 | 87.0 | 2.7 |
| pfu_aug1.0_6803.1_24088.t1 | 4 | 4 | Kelch_6 | 558 | 576 | 7.9e-24 | 82.7 | 0.025 | 42.0 | 4.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6803.1_24088.t1 | gi|118103283|ref|XP_418239.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_6803.1_24088.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6803.1_24088.t1 atgagtcgacctgtagcgctctctaatgttaggagaactggtgacttgaactgccatgtaaaaatgaaccatagccagag ggtaaaagcggaggggtacggcgatagtgtaatacaaagtcttaatgttctaagagagaaaaatgaactgtgcgacttca gagtctctgccgagggtagaacatttgaggtacataaagttttattggcggcaactagtgactattttcgagtgatgttt ggaggtgttatggcagagagcaaacaggatgcagtagacctaaaaggtgtaacggcggatggtctccaacatattataga ctttatatacaccggagaaataggcttacagctcgacaacctcactgaaatcatcaatactgctagccatctacaagtct cctctgcgttagatctttgtagcacatacataaaatctctgatgacgtttgagaattcggaggatttcttaagcatcgca gacacttactcactggacaaggtcctgagtcattgggacaacatgattcttaccaatttctaccagttcacacaaaccca ggattacctgaaactcgatacccaggtattgatcaagtatttgtctaataacggactgaagatttcgtcggagtacaaac tgtttcagtgtctagacaaatggtttcgctatagtccttcaagaataatgagtgatggtgtgccagtgctaagccatata cgatactctcttatgtcagaaagggaactgtctttagttcaagaaagtgatataatgaagagatgccttggggctcttca tctaccgactaaggggttcaagtatcatatagactgtcgggaaggacatcctgtgatcgaggaagtttcgacgataagaa ctgaaacgccgtcgcttgttctagtccatccacataacgggtcatcttatgttccatttcagattacctcacatgatcac acgacaggggtcttctatcgattgttttcagatgttaacggcagtagggactgccgaatgagtgtcattgacaattttgc gtttatgtgtagggtggtagactatgggggaggctctttgatgagctctctttttcgatttgatccacggcatttatgtg gtcaagaactgagacctatgagaagattaaggatggacttttcattagcggcccagggtacatgtttatatgtgtttggt ggatcaacagaacagttcaccattttggattctgtagagtgctataatgtcaccacaaacctttgggtggatatgccgtc cctgcccttagcactgcactctctagcaagtgaagtggtgggcgagaagatttacttgtcaggcggtgtatcgggacagg atcgtcaagcaaccaatacatttatgcattttaacacgcagacacgcaggtacgagtctctgcctggcatgttctacgcc agaagacttcatgaaatggttcattgtggaggaaagatctacgttttcggtgggattccgcgtcagggggttccccttca gggtcaaattccgatcgagtgttacgactttcaatccaagcagtggactatgttttcatcgactctcagtggtagatctg tcggccattacttactctttgagaatcagattctatctctcggccacgaacatcataatgcaaaggaagatgagatatgg atttatgatccttcggtggacgactggtccaagtacgccaaggctccaaaacgaatgaaccttatgaacgccctatgcac tgtaatgaacattaactttgaagaagaaaaggtgtcgtccaccttaggaaatgtttag |
|
Protein
| Protein ID | pfu_aug1.0_6803.1_24088.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6803.1_24088.t1 MSRPVALSNVRRTGDLNCHVKMNHSQRVKAEGYGDSVIQSLNVLREKNELCDFRVSAEGRTFEVHKVLLAATSDYFRVMF GGVMAESKQDAVDLKGVTADGLQHIIDFIYTGEIGLQLDNLTEIINTASHLQVSSALDLCSTYIKSLMTFENSEDFLSIA DTYSLDKVLSHWDNMILTNFYQFTQTQDYLKLDTQVLIKYLSNNGLKISSEYKLFQCLDKWFRYSPSRIMSDGVPVLSHI RYSLMSERELSLVQESDIMKRCLGALHLPTKGFKYHIDCREGHPVIEEVSTIRTETPSLVLVHPHNGSSYVPFQITSHDH TTGVFYRLFSDVNGSRDCRMSVIDNFAFMCRVVDYGGGSLMSSLFRFDPRHLCGQELRPMRRLRMDFSLAAQGTCLYVFG GSTEQFTILDSVECYNVTTNLWVDMPSLPLALHSLASEVVGEKIYLSGGVSGQDRQATNTFMHFNTQTRRYESLPGMFYA RRLHEMVHCGGKIYVFGGIPRQGVPLQGQIPIECYDFQSKQWTMFSSTLSGRSVGHYLLFENQILSLGHEHHNAKEDEIW IYDPSVDDWSKYAKAPKRMNLMNALCTVMNINFEEEKVSSTLGNV |
|