Gene
| Gene Model ID | pfu_aug1.0_6810.1_67557 |
|---|---|
| Locus | scaffold6810.1 : 1 ... 11481 : + |
| To GenomeBrowser | scaffold6810.1:1..11481 |
| Genes list of scaffold | scaffold6810.1 |
| Synonym | pfu_aug2.0_156.1_20352 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6810.1_67557.t1 | 2 | 1 | DNA_pol_E_B | 179 | 271 | 1.2e-26 | 93.2 | 1.2e-19 | 1.8e-15 | 56.7 |
| pfu_aug1.0_6810.1_67557.t1 | 2 | 2 | DNA_pol_E_B | 283 | 331 | 1.2e-26 | 93.2 | 4.8e-13 | 7.2e-09 | 35.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6810.1_67557.t1 | gi|291225848|ref|XP_002732910.1| | PREDICTED: DNA polymerase epsilon subunit 2-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6810.1_67557.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6810.1_67557.t1 aaacagtacattagggttacctcccccttgtctgcatggtacagctacagacaaagtgacgctgttccttgacagatata ccatactacaacagagaactcagagacatgacctgtttacacctccagcaatcggcagtaaaactgacaacgctacaaaa aagtttcagttaaaacctgtggagtttctgttagggagcacagccaaactaggggaaataattgttttaggaatgttaac tcaactcaaagagggtaaatggtacttggaggatcccactggggcagtgcaactagatctgacagaggctaatttccaca caggtttattcacagagaactgctttgtgttagcagagggatggtatgaggacgaggtgttccatgtgaatgcattcgga ttccctcccccagaacctgcaaggactacaaggtcttattttggtaacattaactttttcggtgggctatcaaacgtgtg tgccaaagcgtctgtgaagttaaaacaggtagaacaagagaaccaagatgccatgtttgttatcctatctgatgtttggc tggaccaagttaaggttatggagaagttgagagttttatttactggttactgtgatatgccacctacctgttttattctg tgtggtaactttctatcatcgccccaaggtggtaaacacgttaaagtgctcaaagattgcttacatacttttactgaatt agtactagagtttccctctatagcagagaacagtaggtttctttttgttcctggtccacaggacccaggccctgccacta tattacctagacgtatcactgcgaaaccctccgacctacgaaatatatttgccaagacattagtgagccaaggacattta tgcccgctacctttgcacgtttgtccggtatattggtcgtacgacaatggattacgactctaccctctgcctgatatggt gatatgtgcagacaaatacgatcccttccacactactgccacagactgtatggtcatgaaccctggttcatttccacgga cagactttagcttcaaagtgtatttcccagcatcaaggaacatggaggacagtaagataggggactag |
|
Protein
| Protein ID | pfu_aug1.0_6810.1_67557.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6810.1_67557.t1 NSTLGLPPPCLHGTATDKVTLFLDRYTILQQRTQRHDLFTPPAIGSKTDNATKKFQLKPVEFLLGSTAKLGEIIVLGMLT QLKEGKWYLEDPTGAVQLDLTEANFHTGLFTENCFVLAEGWYEDEVFHVNAFGFPPPEPARTTRSYFGNINFFGGLSNVC AKASVKLKQVEQENQDAMFVILSDVWLDQVKVMEKLRVLFTGYCDMPPTCFILCGNFLSSPQGGKHVKVLKDCLHTFTEL VLEFPSIAENSRFLFVPGPQDPGPATILPRRITAKPSDLRNIFAKTLVSQGHLCPLPLHVCPVYWSYDNGLRLYPLPDMV ICADKYDPFHTTATDCMVMNPGSFPRTDFSFKVYFPASRNMEDSKIGD |
|