Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6840.1_45520
Locus scaffold6840.1 : 183 ... 31725 : -
To GenomeBrowser scaffold6840.1:183..31725
Genes list of scaffold scaffold6840.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_6840.1_45520.t1 gi|198421302|ref|XP_002131108.1| PREDICTED: solute carrier family 17 member 9-like [Ciona intestinalis] 3.0e-17

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_6840.1_45520.t1
Definition-
>pfu_aug1.0_6840.1_45520.t1
atgaaaattttgagtccgaataagactggcgcccggtgggacctagctgtatcagaaatcaactataagtctattcttct
aggccatatgagtatgaataatgccttttttattctgttgtcatggttaccaacttatttccatgaaaactatccacatg
ctaagggttgggtatttaatgtagtaccatggattgtgacaatgtttagctcaatatttagtggttggttagcagatatt
atgcttcaaaaagacgaggacacagtccgctatgatggcggtgatgagattttcgtgtccgaccgaaataatctaaaaca
aaatcaatcgatgatttattcgagtataagtatttccaatcttctagtatacatgtaa

Protein
Protein IDpfu_aug1.0_6840.1_45520.t1
Definition-
>pfu_aug1.0_6840.1_45520.t1
MKILSPNKTGARWDLAVSEINYKSILLGHMSMNNAFFILLSWLPTYFHENYPHAKGWVFNVVPWIVTMFSSIFSGWLADI
MLQKDEDTVRYDGGDEIFVSDRNNLKQNQSMIYSSISISNLLVYM

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