Gene
| Gene Model ID | pfu_aug1.0_6840.1_45521 |
|---|---|
| Locus | scaffold6840.1 : 34316 ... 45165 : - |
| To GenomeBrowser | scaffold6840.1:34316..45165 |
| Genes list of scaffold | scaffold6840.1 |
| Synonym | pfu_aug2.0_75.1_16857 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6840.1_45521.t1 | 2 | 1 | ATP11 | 53 | 142 | 8.7e-21 | 74.5 | 2.0e-07 | 0.00097 | 18.7 |
| pfu_aug1.0_6840.1_45521.t1 | 2 | 2 | ATP11 | 143 | 224 | 8.7e-21 | 74.5 | 1.5e-18 | 7.3e-15 | 55.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6840.1_45521.t1 | gi|260815469|ref|XP_002602495.1| | hypothetical protein BRAFLDRAFT_127139 [Branchiostoma floridae] | 1.0e-13 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6840.1_45521.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6840.1_45521.t1 atgccagctgccgtcagaatgccgtccaaatggttcagtaaggagaatggtaacactatgttgacatgcaccagtacctg tggtttgagatggtcgcagatattacatggacgtacatacagctcagagcaaaaagaaagtaatgagtacgccatagaga gcaatccatactttcaaaaatacaagaaaaaacttgatgaactgaaagtcttagatccagagaagtacgaggctaaagtg aaagagcttgctgccaaggaaaaagaaatgaaagagcaaatgaagaaggatttatcaactcctccagagccaaaacctag aacagatgatgatgatagctcagagcctggttcatggccacctaagtcattagatgatataatgagaatggaccttgtaa tggagagaagtgcagaagaaataggaaagcaactaaaggagaattctccctcttgccttactgtagcacattttccagag ctcaaggaaaagaaaggaattgtgttgatgtcaggacagtatgatgataaattactaagcaaaaatgaagcgttgaattt ggtgcgacaaatgacaatgtattatggacactcggccggtgtgaattttaattttgtcagaatttttaatactttacctg gagagtttaattattttgatcttataaataattacaagtcaatgaaggacaaattagaagaatactatacatag |
|
Protein
| Protein ID | pfu_aug1.0_6840.1_45521.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6840.1_45521.t1 MPAAVRMPSKWFSKENGNTMLTCTSTCGLRWSQILHGRTYSSEQKESNEYAIESNPYFQKYKKKLDELKVLDPEKYEAKV KELAAKEKEMKEQMKKDLSTPPEPKPRTDDDDSSEPGSWPPKSLDDIMRMDLVMERSAEEIGKQLKENSPSCLTVAHFPE LKEKKGIVLMSGQYDDKLLSKNEALNLVRQMTMYYGHSAGVNFNFVRIFNTLPGEFNYFDLINNYKSMKDKLEEYYT |
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