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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6849.1_38414
Locus scaffold6849.1 : 9936 ... 25083 : +
To GenomeBrowser scaffold6849.1:9936..25083
Genes list of scaffold scaffold6849.1
Synonym pfu_aug2.0_530.1_00850

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_6849.1_38414.t1 1 1 CUB 19 104 1.2e-08 34.9 2.1e-12 3.1e-08 33.6

Transcript
Transcript IDpfu_aug1.0_6849.1_38414.t1
Definition-
>pfu_aug1.0_6849.1_38414.t1
atgatttctctacaaatcaaagcattcatcaaagacttggaggggaaacctgccggaccactttatacaagagcaagcgt
agtgtgtaattggaggatacggaatccatacagctaccgagtggttctaaaagtgaaatggatggatatacaaagaacat
tactgtgcaatggagattttgtgtcgttttctgtgaacgggaatgcacatgaatgtggacatgtaaaagaccgtatcacc
agaacaaggaacacgcttatctttataacattcaaatctgactttgatgtccagagatctggattttatgttcaagtcct
tacaatatatgacaagacttcagctgtgattaccacaacgagccataaagaacaaacaagcataatgccatctcatcatg
tgtctactaccatagataataatactccattaaacattactgaatctagaatttctacaacttctgtccattcaacctac
atattcatctcggattacgtcttcgactacaaactttggcacaacgttgtcaacaattcagacatcacatccaactatca
agtcatatgattgagaaaaaggataatccttgccgatgtcaccgtgaatttcaatgtaaaagccgttttacaaagacaga
aaacagacacagttttcaacctagttacctacgtaaataaaacgttccttgaaaacatttccgatgttccaattgattcc
actctttgggagtatgacgatgaatctattgatgattttagaagttcttcagaatttaattcggtttccaacaagaggga
tgtgcacacaaatgacaagctgtcgattatcggaaatgataaggttaataaacgagagccctctattgacagtgccaaag
aaagtgagatggaaaataaaggggcagataactccaatcttaatatcaaacttacagatgaagatataagggctttgaag
ttactaaaagccaagttagagagacagaggggtaacaacgatcagcgtattgttgacaagattaactcggataataaagc
caaaccaacacctaccatgggatcattttatgaacaagaattaaacgaggatgaattgagacaacagcaggtagacagga
tcaaacagcttgccagcgccatcttgaaaagtgatcgtcgggatgttgacacttccggcagcgagaaatcaaaagcagtc
gtcaatccaaaggaaggaacttttggcaatttcagaattgaagtcttacataagttagaagaacggttattacaagatgt
agatctggcattaaggagtggattcaccctggatgagatcatggccgatttggagaaagaagaatcagaggacattcaga
aggaacgacgaaaagaaaatattaagagcagactactcaccttactgttgaaaggggataaaccatga

Protein
Protein IDpfu_aug1.0_6849.1_38414.t1
Definition-
>pfu_aug1.0_6849.1_38414.t1
MISLQIKAFIKDLEGKPAGPLYTRASVVCNWRIRNPYSYRVVLKVKWMDIQRTLLCNGDFVSFSVNGNAHECGHVKDRIT
RTRNTLIFITFKSDFDVQRSGFYVQVLTIYDKTSAVITTTSHKEQTSIMPSHHVSTTIDNNTPLNITESRISTTSVHSTY
IFISDYVFDYKLWHNVVNNSDITSNYQVIXLRKRIILADVTVNFNVKAVLQRQKTDTVFNLVTYVNKTFLENISDVPIDS
TLWEYDDESIDDFRSSSEFNSVSNKRDVHTNDKLSIIGNDKVNKREPSIDSAKESEMENKGADNSNLNIKLTDEDIRALK
LLKAKLERQRGNNDQRIVDKINSDNKAKPTPTMGSFYEQELNEDELRQQQVDRIKQLASAILKSDRRDVDTSGSEKSKAV
VNPKEGTFGNFRIEVLHKLEERLLQDVDLALRSGFTLDEIMADLEKEESEDIQKERRKENIKSRLLTLLLKGDKP

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