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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6849.1_38417
Locus scaffold6849.1 : 45346 ... 50331 : +
To GenomeBrowser scaffold6849.1:45346..50331
Genes list of scaffold scaffold6849.1
Synonym pfu_aug2.0_8120.1_02954

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_6849.1_38417.t1 1 1 p450 43 331 0.0 250.8 0.0 0.0 250.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_6849.1_38417.t1 gi|291238466|ref|XP_002739151.1| 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_6849.1_38417.t1
Definition-
>pfu_aug1.0_6849.1_38417.t1
atgtccacagtgacaagttccatatttaaagaaagcttacataacctagtactccgtgaacacaaacttgattgtgtatt
tatagaaatgaaaaattggtacagtcatgatgatgtgtatatttccaaattagtaagtttaatcgatgacttcctggtga
atcccaatgtcatcggacctctcacgtttcttcctttcctgaagtatataccttttgatccttttcaatggagcaaactc
agaagaatgagcgacgagctgagggaacattgcagaagtattctgaccaatcacagagggtcttacaatccaggacaaat
ccgtgacgtagttgatcgtttgatagataaacaaaatacagagaatgacacgtcagagtcatcatttactgatgacaagt
taatccagtctttgtttgaactgtttatgggtggaacagacacaacgtctactgctatgagatggttcattctattcatg
attaaaaacccagacgttcaacatcgcatgcggaaagaaatcaaagaaaatgttggcgaaggatcactcgttacatggca
agacaaacagtgtcttcgtttctgtgaagctgtgatactagagactctacgcatggggaatatagctccgtttagtatac
ctcataccgtgtctcaggattttatattgagtgattacgtcatacctaaggacgccatattgtttccgtcgattgattct
gtcaattttgatcccgagaaatttgaggatgttcggcgctttaacccagacaggtttgttgacgagaatggcgaactgag
aagaaccaactaccttatgcctttttctacaggtcgtagagcttgcataggcgaatcccttgcgaggatggagttatttc
tatttgctactaacttagtgaacacattcgaattacttgcagaacaggatggccttgagccctctatggagtataacctc
ggcttagtacatggcccaaaaccatacaaactacgttcagtacatttcaatcattga

Protein
Protein IDpfu_aug1.0_6849.1_38417.t1
Definition-
>pfu_aug1.0_6849.1_38417.t1
MSTVTSSIFKESLHNLVLREHKLDCVFIEMKNWYSHDDVYISKLVSLIDDFLVNPNVIGPLTFLPFLKYIPFDPFQWSKL
RRMSDELREHCRSILTNHRGSYNPGQIRDVVDRLIDKQNTENDTSESSFTDDKLIQSLFELFMGGTDTTSTAMRWFILFM
IKNPDVQHRMRKEIKENVGEGSLVTWQDKQCLRFCEAVILETLRMGNIAPFSIPHTVSQDFILSDYVIPKDAILFPSIDS
VNFDPEKFEDVRRFNPDRFVDENGELRRTNYLMPFSTGRRACIGESLARMELFLFATNLVNTFELLAEQDGLEPSMEYNL
GLVHGPKPYKLRSVHFNH

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