Gene
| Gene Model ID | pfu_aug1.0_6856.1_67571 |
|---|---|
| Locus | scaffold6856.1 : 1 ... 20740 : + |
| To GenomeBrowser | scaffold6856.1:1..20740 |
| Genes list of scaffold | scaffold6856.1 |
| Synonym | pfu_aug2.0_2375.1_18796 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6856.1_67571.t1 | 3 | 1 | TSP_1 | 484 | 533 | 4.5e-27 | 93.9 | 1.6e-15 | 5.8e-12 | 45.5 |
| pfu_aug1.0_6856.1_67571.t1 | 3 | 2 | TSP_1 | 540 | 590 | 4.5e-27 | 93.9 | 3.7e-15 | 1.4e-11 | 44.3 |
| pfu_aug1.0_6856.1_67571.t1 | 3 | 3 | TSP_1 | 597 | 622 | 4.5e-27 | 93.9 | 4.2e-06 | 0.016 | 15.3 |
Transcript
| Transcript ID | pfu_aug1.0_6856.1_67571.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6856.1_67571.t1 gtcagaatgccccggacaacagaggtacggagtttatcattggttacatggagaactaccttacagattacaaactggag ctgtttgtgaccacgtccaagaccacgtcggtcagcgtcagggtcagagcgccaaagatgaccaatccttcactcgacga gtccttctctattacggccggatcggtcaagcaactcaaattcagctacaagttccggttgacgggaacggaaatgagca gcaagggaattctggtcactgcctcggacgagatcgttatttacggcgttaataagcaaagctactctaacgacgctttc ctcggtctgcccacagacgtactcggcaaggaatattacgccacgacgtacacgcccgcctacagatattgcttactcct cgtggtcggcgtacacgacaatacgaaagtagacataacttttgccaacaacaatggcatttctgtctcttatggtggga agaaatatagcaaaaatagcaaactgtctttgacgatggacaggtactccacgttccaggctcacacgacgggcgatttg actggtacgaacatcaaagccgacaaagttgtttcattcttcagtgggaataaaaagacgaatattggaaggggaggcac gcaggatcacttggtagaacagcaggtgcccgttgataactggggtaaaaagtttgccattacacctatcccagaacgta acaccggtgattacttccggtttgtcgccagcgaatcaggaacgaatatcaaggttacaggtcagaagaacggacagtcg ttttcggattcgttctcgctctctgcgcccggaaaatgggtacagaagcactacgactccaagttattcgcctatgttga atcaaaccacgctgttttggtagtacagtacgtactcagtcagatcacggacaaagccgatcccgccatgtttatcatac ctcctatagagcagtacgccgctgactatacgttcagtacgcctaaatactcccaggggagctactacaattactttatg ttcgtcgtaaagaagtcggagaagtcaggactccgtatggatggtcagtcattcccctctaacaccgtatataacgacat ccccggcactgacctggtgggcggcttcataaagatcacagacggtacgcatacgtgcagacacacgtcacccatctcca tctttggtggcttcctgtacggcagacaacacgcggagtcatatggcttcccgaccggaatgagaatggcgccaattaac gtgccctgcgtacctactactacaactaccggcgatggccttgacaacgactgtgacgggcttatagacgaagaaatgtg ccacgataactggatcggaactgatgatgacggagatggaaccaacgacgaggactgcgctaagccgcctccagtcgatg gaaactggggaaattggggttcatgggccacatgctcactcacgtgtggaggcggaagtcagaaccgacagcggtcatgc tcaaatccgagaccacagtatggcggcgcaagttgtgcgggaagtgtccagtcaactcaggcgtgcaacacacatcattg tcctattgatggtggtttgtcgtcatggggtgcttggggtacgtgcaccgtgacttgtggaggaggaacccaggatagaa ccaggacctgtaccaaccctagacctcagtatggcggtgctccttgtagtggagcaacatcccagactcaagcgtgtaac acacaagtgtgcataattgacggtgcgtggtcgacctggggatcttggggcacgtgctctgtgtcttgtggaaccgaaat tcatatgaacaaaacaaataaaaaaagtttgaaacttagcgccgtgctgacattgctctgggtgcaacgaagcttggaca gcatgcggatccccaaatttgtaagtgtatctggctacgtagctgagacaacttggtcgggtcagaacntgaccttcagt tacaagttccgtttgttcggaaccgaaatgagcaacaagggaattctgattacagcttccgacgaggtcgtcatttacgg cgtgaacaagcagaagcactcaaacgacgctttcctaggtctcccgacggacgtactgggcaaggagtactacgcaacga cgtacgctcctgcatacagatattgcttactcctcgtggttggtgtgcacgataatacgaaggtagagattacattcgcc gacaacaacgggatatctgtcagatacggggggaagacatatggtaaaaagagcaagcttaccctgaatatgaacagata ttccacgttccaggctcatacgacaggagatttaactggcacgtacatcaaggcggacaaagccgtcacatttttcagcg gtaataaaaagacaaacatcggatccggcgggtctcaggatcacttggtagaacagcaggtgcccgttgataactgggga aagaaatttgccattcaacccattccagaacgagtcacaggcgactacttccggtttgtagcgaccgaatcgggaacaag catcaaagtaaccggacagaaaagcggacgttccttctccgattcctttaccctctctggtcctggaaaatggaagcaga aacattatgattctaaacttttcgcttatgtagagtctagcaaggccatattggttgtccagtacgtactcagtcaagtt aacgacaacgccgatccagccatgtttatcattcctccaatcgagcagtacgccgccgactacactttcgcaacgcctaa atattctggaggcgattattacaactacttcatgtttgtcgttaaaaaatcagaaaagtcaggactccgtatggacggac aggctttcccatctaacaccaagtataacgacattcccggtactgatctcgtagccggctttatcaagatagctgatggt acacacacagctcgacacacctcgcccatttctatcttcggaggtttcctttacggtcgacaaagacttgaatcctacgc ctttccgacaggcatgcgaatggctcccattaacgtgccatgtgtaccaactacaactcagaccggagacggtatagaca atgattgtgacggactgattgacgaggaaatgtgccatgataactggaaaggaacagatgacgatggtgatggtacaaat gacgaggactgtgctagaccacctcccgtcgatcagggactacaactagaacaagaacttgctcaaatccggctccaaaa tatgacggcaaacaatgttctggtgactcgtcccagtccaaatcttgtacacctagctctaattgtccagtacatggagg ttggggaagttatggatcatggagttcctgttctaaaacatgcgggggcgggaccagtaccagaacgaggtcatgtaata gtcccaccccaaaatatggcggaaacagctgttccggaagtgcctcagagtcaaaaacgtgtggaacctctagctgccca ggtgaagtatcaaagtagaacaagtgatccaggaatataa |
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Protein
| Protein ID | pfu_aug1.0_6856.1_67571.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6856.1_67571.t1 QNAPDNRGTEFIIGYMENYLTDYKLELFVTTSKTTSVSVRVRAPKMTNPSLDESFSITAGSVKQLKFSYKFRLTGTEMSS KGILVTASDEIVIYGVNKQSYSNDAFLGLPTDVLGKEYYATTYTPAYRYCLLLVVGVHDNTKVDITFANNNGISVSYGGK KYSKNSKLSLTMDRYSTFQAHTTGDLTGTNIKADKVVSFFSGNKKTNIGRGGTQDHLVEQQVPVDNWGKKFAITPIPERN TGDYFRFVASESGTNIKVTGQKNGQSFSDSFSLSAPGKWVQKHYDSKLFAYVESNHAVLVVQYVLSQITDKADPAMFIIP PIEQYAADYTFSTPKYSQGSYYNYFMFVVKKSEKSGLRMDGQSFPSNTVYNDIPGTDLVGGFIKITDGTHTCRHTSPISI FGGFLYGRQHAESYGFPTGMRMAPINVPCVPTTTTTGDGLDNDCDGLIDEEMCHDNWIGTDDDGDGTNDEDCAKPPPVDG NWGNWGSWATCSLTCGGGSQNRQRSCSNPRPQYGGASCAGSVQSTQACNTHHCPIDGGLSSWGAWGTCTVTCGGGTQDRT RTCTNPRPQYGGAPCSGATSQTQACNTQVCIIDGAWSTWGSWGTCSVSCGTEIHMNKTNKKSLKLSAVLTLLWVQRSLDS MRIPKFVSVSGYVAETTWSGQNXTFSYKFRLFGTEMSNKGILITASDEVVIYGVNKQKHSNDAFLGLPTDVLGKEYYATT YAPAYRYCLLLVVGVHDNTKVEITFADNNGISVRYGGKTYGKKSKLTLNMNRYSTFQAHTTGDLTGTYIKADKAVTFFSG NKKTNIGSGGSQDHLVEQQVPVDNWGKKFAIQPIPERVTGDYFRFVATESGTSIKVTGQKSGRSFSDSFTLSGPGKWKQK HYDSKLFAYVESSKAILVVQYVLSQVNDNADPAMFIIPPIEQYAADYTFATPKYSGGDYYNYFMFVVKKSEKSGLRMDGQ AFPSNTKYNDIPGTDLVAGFIKIADGTHTARHTSPISIFGGFLYGRQRLESYAFPTGMRMAPINVPCVPTTTQTGDGIDN DCDGLIDEEMCHDNWKGTDDDGDGTNDEDCARPPPVDQGLQLEQELAQIRLQNMTANNVLVTRPSPNLVHLALIVQYMEV GEVMDHGVPVLKHAGAGPVPERGHVIVPPQNMAETAVPEVPQSQKRVEPLAAQVKYQSRTSDPGI |
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