Gene
| Gene Model ID | pfu_aug1.0_6864.1_24097 |
|---|---|
| Locus | scaffold6864.1 : 11416 ... 16689 : + |
| To GenomeBrowser | scaffold6864.1:11416..16689 |
| Genes list of scaffold | scaffold6864.1 |
| Synonym | pfu_aug2.0_1269.1_31575 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6864.1_24097.t1 | 1 | 1 | BIR | 166 | 232 | 4.5e-11 | 43.0 | 6.0e-15 | 4.5e-11 | 43.0 |
| pfu_aug1.0_6864.1_24097.t1 | 2 | 1 | zf-C3HC4_3 | 202 | 225 | 1.1e-09 | 37.8 | 0.084 | 620.0 | 0.1 |
| pfu_aug1.0_6864.1_24097.t1 | 2 | 2 | zf-C3HC4_3 | 368 | 410 | 1.1e-09 | 37.8 | 1.4e-13 | 1.1e-09 | 37.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_6864.1_24097.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6864.1_24097.t1 atgacttgtgtagcagagctgagaccaatgaattctctctaccaacttccaagtggattaatgaaggaaaatgaagattc caaatacgggattatggaaagttcctgtgcctccaactctcgctatgctcatgatacatcaatggcgaaatctagttacc aaaattctgataatggatatatcgtaactgctccatcagatgatgttaattccacaccatcttcatatccgaggcgactt aatttgaagtggtcaaatgcttcgaaattttcaagtgttctgtactccgaaagtatgttggatagtcataatgggaatcg ttgcgatggtgtgcaagaggatgtctgcatgacaactttcgccagcaaagagaagggaaaaaactttccaacagatgttc ttgatggagactctggatatgattccaatacttcaaacttgtcaaatggatcagtggaaaatgcgatgtatcctcaattc aaaaacattaatgcccgactcagaagcttttccgaatgtcaatccgttatctatcaaaaagctcaaaaactttcagaagc tggtttcttcttagtgacttttatgattcaaagtttggcacgatgccatagctgcggaatagaattaaagaatttggaaa caatacacgatcctatgactgagcatgcgcgctgctctcccaactgtagttacttacgtgccatgaaaggggatgaattt attaaatctgcacaacgtatgcataagcagaactctttgcaagaaaaccactcgcataagtcatcaaacggtacaggatc aagtcatagtaaagatgtagaaaagtatcccgattctacactacagaagaatcctttattaaccgatgctgcacaaagag taatcaaaatgggctacctaccaaagcaagttaataaggctgtggaagaagttttgaaattaaaagattggatgacaatg acgtgcaatgatattattggcaagttaaaagagcagaacgttttgccagcatctacttcgaatgatcatccaaatgtatt aggaaaatttgactcgtcgaacattgcgtcgatcaaagaagaaattcgaacacttaaagaaagaaaactttgtaaagtgt gctgtgaagaggatgtttctatagtttttctgccttgtgcacatttagtttgttgtgcacaatgtgcaccagctattcaa aaatgtgctgtttgtaggaaacttgtcaaaggaactgtgagagtttcattctcaaattag |
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Protein
| Protein ID | pfu_aug1.0_6864.1_24097.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6864.1_24097.t1 MTCVAELRPMNSLYQLPSGLMKENEDSKYGIMESSCASNSRYAHDTSMAKSSYQNSDNGYIVTAPSDDVNSTPSSYPRRL NLKWSNASKFSSVLYSESMLDSHNGNRCDGVQEDVCMTTFASKEKGKNFPTDVLDGDSGYDSNTSNLSNGSVENAMYPQF KNINARLRSFSECQSVIYQKAQKLSEAGFFLVTFMIQSLARCHSCGIELKNLETIHDPMTEHARCSPNCSYLRAMKGDEF IKSAQRMHKQNSLQENHSHKSSNGTGSSHSKDVEKYPDSTLQKNPLLTDAAQRVIKMGYLPKQVNKAVEEVLKLKDWMTM TCNDIIGKLKEQNVLPASTSNDHPNVLGKFDSSNIASIKEEIRTLKERKLCKVCCEEDVSIVFLPCAHLVCCAQCAPAIQ KCAVCRKLVKGTVRVSFSN |
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