Gene
| Gene Model ID | pfu_aug1.0_6864.1_24098 |
|---|---|
| Locus | scaffold6864.1 : 35686 ... 46222 : + |
| To GenomeBrowser | scaffold6864.1:35686..46222 |
| Genes list of scaffold | scaffold6864.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6864.1_24098.t1 | 3 | 1 | DED | 10 | 84 | 1.1e-09 | 38.2 | 6.6e-13 | 2.4e-09 | 37.1 |
| pfu_aug1.0_6864.1_24098.t1 | 3 | 2 | DED | 104 | 154 | 1.1e-09 | 38.2 | 0.06 | 220.0 | 2.0 |
| pfu_aug1.0_6864.1_24098.t1 | 3 | 3 | DED | 150 | 190 | 1.1e-09 | 38.2 | 0.35 | 1300.0 | -0.5 |
| pfu_aug1.0_6864.1_24098.t1 | 2 | 1 | Peptidase_C14 | 185 | 261 | 3.4e-16 | 59.6 | 2.5e-15 | 9.3e-12 | 45.1 |
| pfu_aug1.0_6864.1_24098.t1 | 2 | 2 | Peptidase_C14 | 292 | 332 | 3.4e-16 | 59.6 | 1.7e-05 | 0.064 | 12.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6864.1_24098.t1 | gi|344268271|ref|XP_003405985.1| | PREDICTED: caspase-10 [Loxodonta africana] | 8.0e-22 |
Transcript
| Transcript ID | pfu_aug1.0_6864.1_24098.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6864.1_24098.t1 atgtcggatcggcaaacacgatatgacctaatcaaacttcaacaagagctagatacggatgattttagtggattgaaata tctctcaaaagatcgggttaaaagaaatagattaagtgaattacaatctgcattagatttgtttgagcgcttggaggaag taggtgccataagtgtaaaaaatggagacgtcggctttttgcttgaagccttactcctcatggacaaaaggaagctgata cgaactttgcatgaaacgcccgatgatgtcaaaggaagatacaatggaaacaagtctaattttactccattcaggagact tttctttactcttggtgaatgcatgggatcagaggaacgcattaagataaaagattaccttaaaagagaacacagaatta gaaaaggtaccctagagaaggccggtgatatatggcaactccttacattgctggaggaaaatctaccttcgcctgacatt caaactctgcagaaaatcatatccttattcgacgacgaagctgtacatgaagagtttgaaaaattcaagaaaggtttatg tatgatcatcaacaatgagaagttcgacaacgaatccgtattcaaacgtcgttacggtacagatcgtgacagagatgctc ttaagaaaacttttgaatattttggatttgatgtaaaagtcaaagaaaatattactgcaaatgaaatgagagactggcta cgtgaatattcgatgatggatcatactcggcacagtaccttggtcgtttgtatactgtcacatgtttggacaggaaatga tcctacaccaaatgaagctgtcagcgatgctcaaaatgtaagtcaaggtacctattcccaagaatctcggaccagttgca tacccatcattccaatggatgccgactttttactgggcatggcaactgtcataaaccacgtgtcgtatagaacagatgac ggttccttttacatacaatccttgacaaagaatctcatgaaattgtctccgaggtaa |
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Protein
| Protein ID | pfu_aug1.0_6864.1_24098.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6864.1_24098.t1 MSDRQTRYDLIKLQQELDTDDFSGLKYLSKDRVKRNRLSELQSALDLFERLEEVGAISVKNGDVGFLLEALLLMDKRKLI RTLHETPDDVKGRYNGNKSNFTPFRRLFFTLGECMGSEERIKIKDYLKREHRIRKGTLEKAGDIWQLLTLLEENLPSPDI QTLQKIISLFDDEAVHEEFEKFKKGLCMIINNEKFDNESVFKRRYGTDRDRDALKKTFEYFGFDVKVKENITANEMRDWL REYSMMDHTRHSTLVVCILSHVWTGNDPTPNEAVSDAQNVSQGTYSQESRTSCIPIIPMDADFLLGMATVINHVSYRTDD GSFYIQSLTKNLMKLSPR |
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