Gene
| Gene Model ID | pfu_aug1.0_6866.1_45526 |
|---|---|
| Locus | scaffold6866.1 : 40426 ... 46718 : + |
| To GenomeBrowser | scaffold6866.1:40426..46718 |
| Genes list of scaffold | scaffold6866.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6866.1_45526.t1 | 4 | 1 | Sel1 | 61 | 86 | 6.5e-17 | 61.5 | 0.00018 | 0.2 | 12.3 |
| pfu_aug1.0_6866.1_45526.t1 | 3 | 1 | TPR_6 | 62 | 86 | 2.6e-07 | 30.6 | 3.2e-05 | 0.036 | 14.5 |
| pfu_aug1.0_6866.1_45526.t1 | 4 | 2 | Sel1 | 92 | 124 | 6.5e-17 | 61.5 | 0.001 | 1.2 | 9.8 |
| pfu_aug1.0_6866.1_45526.t1 | 3 | 2 | TPR_6 | 92 | 127 | 2.6e-07 | 30.6 | 0.0015 | 1.8 | 9.2 |
| pfu_aug1.0_6866.1_45526.t1 | 4 | 3 | Sel1 | 140 | 173 | 6.5e-17 | 61.5 | 3.7e-09 | 4.3e-06 | 27.1 |
| pfu_aug1.0_6866.1_45526.t1 | 3 | 3 | TPR_6 | 140 | 158 | 2.6e-07 | 30.6 | 0.0029 | 3.3 | 8.3 |
| pfu_aug1.0_6866.1_45526.t1 | 4 | 4 | Sel1 | 179 | 210 | 6.5e-17 | 61.5 | 2.1e-05 | 0.024 | 15.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6866.1_45526.t1 | gi|291229464|ref|XP_002734693.1| | PREDICTED: LRP2-binding protein-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6866.1_45526.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6866.1_45526.t1 atggagctgacaaaggaaatctctcgggacaacatcactctcacatttgacaaacagaacattctgaatgacatcgcaca ggaaacacgcgacactcctggatatgggtctctcacagaggaggaactcatggagaaagtggaggccattctgctagaga ggatcaaaaacggagacaaaaaagcctactttcaactgggtcttttctattatgaacaaaatatttacgataaagccaga atttactttgagagggcaaaggattttgactatcaagccttgtacatgttagcgtgtatgctttatgatggtcaaggatc taaaacaccagaaaaatcagaaacagctttagcagttgactatctcaagaaaatagtagaagcaaaatctgcgctggcta agcatctgagattttcagcacactacaacttggggagggcttacttccaaggctacggggtgaaacaatctgatgaaaaa gctgaagagcattggctgatagctgcagatgatggtaatcccaaagctagtgtgaaggctcagacagtactaggaatgtt ctattctagagaagaaagtaaagatctggagaaagcgttcttctggcacagtgaggcatgtggcaatggtagcttagaat ctcaagatagctattcttaa |
|
Protein
| Protein ID | pfu_aug1.0_6866.1_45526.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6866.1_45526.t1 MELTKEISRDNITLTFDKQNILNDIAQETRDTPGYGSLTEEELMEKVEAILLERIKNGDKKAYFQLGLFYYEQNIYDKAR IYFERAKDFDYQALYMLACMLYDGQGSKTPEKSETALAVDYLKKIVEAKSALAKHLRFSAHYNLGRAYFQGYGVKQSDEK AEEHWLIAADDGNPKASVKAQTVLGMFYSREESKDLEKAFFWHSEACGNGSLESQDSYS |
|