Gene
| Gene Model ID | pfu_aug1.0_68724.1_63707 |
|---|---|
| Locus | scaffold68724.1 : 206 ... 13506 : + |
| To GenomeBrowser | scaffold68724.1:206..13506 |
| Genes list of scaffold | scaffold68724.1 |
| Synonym | pfu_aug2.0_244.1_13866 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_68724.1_63707.t1 | 2 | 1 | EGF_CA | 56 | 90 | 7.6e-14 | 51.4 | 6.7e-11 | 1.6e-07 | 31.1 |
| pfu_aug1.0_68724.1_63707.t1 | 2 | 1 | EGF | 59 | 85 | 4.9e-07 | 29.5 | 1.0e-07 | 0.00026 | 20.8 |
| pfu_aug1.0_68724.1_63707.t1 | 2 | 1 | FXa_inhibition | 62 | 86 | 5.7e-13 | 48.7 | 5.0e-08 | 0.00012 | 22.0 |
| pfu_aug1.0_68724.1_63707.t1 | 3 | 1 | EGF_3 | 64 | 90 | 5.6e-06 | 26.2 | 2.0e-05 | 0.049 | 13.6 |
| pfu_aug1.0_68724.1_63707.t1 | 2 | 1 | cEGF | 75 | 97 | 3.5e-09 | 36.1 | 2.5e-09 | 6.2e-06 | 25.7 |
| pfu_aug1.0_68724.1_63707.t1 | 2 | 2 | EGF_CA | 94 | 133 | 7.6e-14 | 51.4 | 2.8e-09 | 6.9e-06 | 25.9 |
| pfu_aug1.0_68724.1_63707.t1 | 2 | 2 | FXa_inhibition | 98 | 133 | 5.7e-13 | 48.7 | 3.1e-11 | 7.7e-08 | 32.3 |
| pfu_aug1.0_68724.1_63707.t1 | 2 | 2 | EGF | 98 | 123 | 4.9e-07 | 29.5 | 1.6e-05 | 0.04 | 13.8 |
| pfu_aug1.0_68724.1_63707.t1 | 3 | 2 | EGF_3 | 98 | 125 | 5.6e-06 | 26.2 | 4.6e-07 | 0.0011 | 18.8 |
| pfu_aug1.0_68724.1_63707.t1 | 2 | 2 | cEGF | 115 | 134 | 3.5e-09 | 36.1 | 0.00014 | 0.34 | 10.6 |
| pfu_aug1.0_68724.1_63707.t1 | 3 | 3 | EGF_3 | 132 | 153 | 5.6e-06 | 26.2 | 0.79 | 2000.0 | -1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_68724.1_63707.t1 | gi|115717771|ref|XP_782645.2| | 5.0e-27 |
Transcript
| Transcript ID | pfu_aug1.0_68724.1_63707.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_68724.1_63707.t1 atgtattttcgcattagcgtaaaagcatatcagatccccctttccagaattatcggtgacattgaattgctgtcatcatc accaaacaagaaatacttacctgatatgtacatcaatatgaacatcgagaccattaccgaatttgacgagtttccattga gctatattgacgagtgtgacctgaatacaacatgtgaccatacctgtgtgaacactgccggtagtttttactgcacctgc aaagctggatatcagctgtacggagccactcattgtgcagatttaaatgaatgttccattgacaatggtggttgccaaca aagatgtaccaataccgaaggaagttttacgtgcctgtgtaataatggacagaagcttcatcccaatggcaaagactgtg ttccatggaaccagtgtttgccgttccccaaacctcctaaatcttccatatcttgtaccaaacatcgtccaggagaggaa tttgatcaaaaagcaaagcaaaatcaccatgatgaccatggtgatacaacgcagattctgatattcaacgaggcttataa atacgcatatagaaaatgctgttactattatagatag |
|
Protein
| Protein ID | pfu_aug1.0_68724.1_63707.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_68724.1_63707.t1 MYFRISVKAYQIPLSRIIGDIELLSSSPNKKYLPDMYINMNIETITEFDEFPLSYIDECDLNTTCDHTCVNTAGSFYCTC KAGYQLYGATHCADLNECSIDNGGCQQRCTNTEGSFTCLCNNGQKLHPNGKDCVPWNQCLPFPKPPKSSISCTKHRPGEE FDQKAKQNHHDDHGDTTQILIFNEAYKYAYRKCCYYYR |
|