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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6887.1_60143
Locus scaffold6887.1 : 4196 ... 34024 : +
To GenomeBrowser scaffold6887.1:4196..34024
Genes list of scaffold scaffold6887.1
Synonym pfu_aug2.0_154.1_13695

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_6887.1_60143.t1 gi|224111172|ref|XP_002198315.1| 1.0e-20

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_6887.1_60143.t1
Definition-
>pfu_aug1.0_6887.1_60143.t1
atgtatgccaacctgaccaccggagaatgtgtgtgggatccacccccaggggtcaaaattcattatagcggagctctgag
ctttgttgagatgacttttggcatgagttcagcatcagtaaaaaaagtgatgttcagattcacattaacattattggaat
caaatgaggtaaatgtgcagcagttgcgaagtcaaaatgtgaaaaaaagacatatgtcgtcagatggacaagaacataag
aagacagacgacaatcagtggtgggagctatacgatcctaatacttcacgcttctactactacaatgccacgagccagaa
aacggtctggcaccgacctcaacactgtgatattataccacttgccaagctacagaggtttggtcgtcaggactccactt
cctcacacagtagttcaagtcatcatgagagctttaagggtcgttctgtgaacggtcgtcgtgggagccactcgtcgcag
tcaactcaggctggctactcctcctccagtcccccagtctctgtggtccagagggatttagagatgtcacccaggacaag
tgctgttcagtgtgatacatcgtcattatcaccgagaagcaccgattcccctcgattgtccagaacacagtctctccagc
gctcaacgtcggagtctgttggcaatacgccaagtagatcaagtagctacagactgccagacgtaaggggcagggatgac
atgcacagcagagccgatccaaggtcacgggatgacctctacttatccggatctgattattctatgccagtgttaaatcc
agcaagaagacaggccagtttctctgacagagactatgtgagccactccgattcttacggttctgtttctagtcgtaagg
atgcctttacaccgcctttaggctttgtcaatcctgatagccttagtggccatagtcaggaagtgcatgaaagagtgacc
tatagtcccaacctggcttccggggcagggccagatagattaacatacagtcccagtctctcatcagggtcaggaactga
acgcgagtgtatagcttttagtcaggatattgtaaatcaacaaggtaatgttagccctctgccacataccacaaaaccta
gatctttccctagaacaaatcctgcatatgtaggagtcccaaaacgaaatggtagcactgcttacaagaggataaacatt
gatcaacaggcattaaactatgacccagcatttagcgagcctgttacctataacactgccggcatgcaggtagcaccaaa
ggactatgtgggtggtgaatattattacccacacgaacgttcagacagtgatacatcacattcttcaactcgtgcaatca
tacatgaacgaactgacagccaagcatctcattcatctcggaatagagaatctgattctcaatcttcacatgggtctatc
tctaaaagtgttcctgatgttcaagtatcgcatgacattcagcataatgacagtatcgcatcgttcagtaggagcatgtc
atcacagggatcacagagaagtataagtaaagctccggaacacattcattcacggtcgaatagtcagctatcccagcagt
catctaacggattatctgaatcttccgaatcggagccggattatgctaatgtacccccgtcaaagcatgagctggaagcg
gatatttataggcaggtcctaaaggaacaacaaaatattctgtaccaggaagattaccatggtaacgtgatgccaacaca
aacttttgaccctgccttaagtagaggtcacagatcacttcctgctatccagaatcaccatcctgaggtggagttgaacc
agagctatgaggaggatgatattaacagcaatctatttaatgtcatgcacgtacctgatcatatggcgagtagattcaat
aaggatgcctttcactcccatcatgcgtctgtcaaacggaagaagcctgacaagggtgattcctcagctgagagccctat
catggagaaaagccattccatgcagggggagataattcaacaacgccctgcgtccatggttgtgccctcgcagtctgatg
ctaacgtttcacttagtcccagtataggttctctgaatagacagaatcgagcaggtactgcacctcccatcaggtcagct
agcccactctcacagaaacagaaactaccctctgacagtgatatagaaaactttatgaatagacacaagaaaggactatt
tgggaagaagatgtcactagagtctatgctgatttggtctaaggtgagaaaagaaaccattatgattttcataggtcatg
ggtcacaactctga

Protein
Protein IDpfu_aug1.0_6887.1_60143.t1
Definition-
>pfu_aug1.0_6887.1_60143.t1
MYANLTTGECVWDPPPGVKIHYSGALSFVEMTFGMSSASVKKVMFRFTLTLLESNEVNVQQLRSQNVKKRHMSSDGQEHK
KTDDNQWWELYDPNTSRFYYYNATSQKTVWHRPQHCDIIPLAKLQRFGRQDSTSSHSSSSHHESFKGRSVNGRRGSHSSQ
STQAGYSSSSPPVSVVQRDLEMSPRTSAVQCDTSSLSPRSTDSPRLSRTQSLQRSTSESVGNTPSRSSSYRLPDVRGRDD
MHSRADPRSRDDLYLSGSDYSMPVLNPARRQASFSDRDYVSHSDSYGSVSSRKDAFTPPLGFVNPDSLSGHSQEVHERVT
YSPNLASGAGPDRLTYSPSLSSGSGTERECIAFSQDIVNQQGNVSPLPHTTKPRSFPRTNPAYVGVPKRNGSTAYKRINI
DQQALNYDPAFSEPVTYNTAGMQVAPKDYVGGEYYYPHERSDSDTSHSSTRAIIHERTDSQASHSSRNRESDSQSSHGSI
SKSVPDVQVSHDIQHNDSIASFSRSMSSQGSQRSISKAPEHIHSRSNSQLSQQSSNGLSESSESEPDYANVPPSKHELEA
DIYRQVLKEQQNILYQEDYHGNVMPTQTFDPALSRGHRSLPAIQNHHPEVELNQSYEEDDINSNLFNVMHVPDHMASRFN
KDAFHSHHASVKRKKPDKGDSSAESPIMEKSHSMQGEIIQQRPASMVVPSQSDANVSLSPSIGSLNRQNRAGTAPPIRSA
SPLSQKQKLPSDSDIENFMNRHKKGLFGKKMSLESMLIWSKVRKETIMIFIGHGSQL

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