Gene
| Gene Model ID | pfu_aug1.0_6887.1_60144 |
|---|---|
| Locus | scaffold6887.1 : 34156 ... 45564 : + |
| To GenomeBrowser | scaffold6887.1:34156..45564 |
| Genes list of scaffold | scaffold6887.1 |
| Synonym | pfu_aug2.0_154.1_13696 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6887.1_60144.t1 | 3 | 1 | MyTH4 | 12 | 47 | 4.7e-10 | 39.4 | 4.1e-11 | 3.1e-07 | 30.3 |
| pfu_aug1.0_6887.1_60144.t1 | 3 | 2 | MyTH4 | 60 | 106 | 4.7e-10 | 39.4 | 0.00049 | 3.6 | 7.5 |
| pfu_aug1.0_6887.1_60144.t1 | 1 | 1 | RhoGAP | 137 | 247 | 6.5e-21 | 74.5 | 1.4e-24 | 1.1e-20 | 73.8 |
| pfu_aug1.0_6887.1_60144.t1 | 3 | 3 | MyTH4 | 240 | 281 | 4.7e-10 | 39.4 | 0.18 | 1300.0 | -0.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6887.1_60144.t1 | gi|12697921|dbj|BAB21779.1| | KIAA1688 protein [Homo sapiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_6887.1_60144.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6887.1_60144.t1 atgggtgatcgtaaaactaagctgacccagatggctgctgcacaggaagtgatcaataaggggtggagcatcattaacct gcgggatgaaatctacatgcaactctgtaaacagaccaccgaaaatagaaaaggtcattatgggaaaataagcaatacct tttgctctatgaatttcatcctttgtaaagaaaatcgcaatgataaggtgcctattagtcattttgccatacagtgccaa agacgactggacaagatgatgcagagtggaccaaagaaaggacagagaaagccaaatatggatgaaatagagcaggcaaa gaaatcagtatttaatccttcaatgtttgggagcactctagaggacataatgatattacaaaaagatcggttttcggagc gacggttgccatggatacagacaacattatcagaggaggtgctccggctaaatggagctcaaactgagggcattttcagg gtaccgggggacattgatgaagtgaatgcactgaagctgaaatgtgatcagtggtcactgcctacagactgtcctgaccc tcacatccctgcttccctactcaaactatggtacagagagctacatgacccccttatacccgcagaattctaccacgatt gtatagaaaattaccagagtccagacgcggccattgaagttgttagtcgactccctgatattaatagactagtacttgca tacttaatacgcttcctacagccacctggttcgactggtcctagaagaaggaaaaccaaagaagatttctatgctttctg taccatgatactagagtatacccagtatgaatctactaggcgtgatgtatgtacatag |
|
Protein
| Protein ID | pfu_aug1.0_6887.1_60144.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6887.1_60144.t1 MGDRKTKLTQMAAAQEVINKGWSIINLRDEIYMQLCKQTTENRKGHYGKISNTFCSMNFILCKENRNDKVPISHFAIQCQ RRLDKMMQSGPKKGQRKPNMDEIEQAKKSVFNPSMFGSTLEDIMILQKDRFSERRLPWIQTTLSEEVLRLNGAQTEGIFR VPGDIDEVNALKLKCDQWSLPTDCPDPHIPASLLKLWYRELHDPLIPAEFYHDCIENYQSPDAAIEVVSRLPDINRLVLA YLIRFLQPPGSTGPRRRKTKEDFYAFCTMILEYTQYESTRRDVCT |
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