Gene
| Gene Model ID | pfu_aug1.0_6888.1_52843 |
|---|---|
| Locus | scaffold6888.1 : 8969 ... 31327 : - |
| To GenomeBrowser | scaffold6888.1:8969..31327 |
| Genes list of scaffold | scaffold6888.1 |
| Synonym | pfu_aug2.0_754.1_14529 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6888.1_52843.t1 | 6 | 1 | Xpo1 | 34 | 121 | 7.1e-06 | 25.9 | 9.6e-10 | 7.1e-06 | 25.9 |
| pfu_aug1.0_6888.1_52843.t1 | 6 | 2 | Xpo1 | 158 | 223 | 7.1e-06 | 25.9 | 0.023 | 170.0 | 2.0 |
| pfu_aug1.0_6888.1_52843.t1 | 6 | 3 | Xpo1 | 393 | 420 | 7.1e-06 | 25.9 | 0.68 | 5000.0 | -2.8 |
| pfu_aug1.0_6888.1_52843.t1 | 6 | 4 | Xpo1 | 477 | 503 | 7.1e-06 | 25.9 | 0.025 | 190.0 | 1.9 |
| pfu_aug1.0_6888.1_52843.t1 | 6 | 5 | Xpo1 | 548 | 574 | 7.1e-06 | 25.9 | 0.058 | 430.0 | 0.7 |
| pfu_aug1.0_6888.1_52843.t1 | 6 | 6 | Xpo1 | 611 | 644 | 7.1e-06 | 25.9 | 0.51 | 3800.0 | -2.4 |
Transcript
| Transcript ID | pfu_aug1.0_6888.1_52843.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6888.1_52843.t1 aatttgataaacagacagtggttaggattccctagtcaggataaactggaaattagatctactctgaaccgcttcctgtt ggagcaccacgatcatgtaccgtcctatatacgtaacaaactggtcaagcttgtggtggacattggtcgtatcgactggc cgcatttctatccagacttcttctcaagtatcctacaggagtttgaggactacttattacaaatgtttcagcagactttc tatttgttacaaaaactgacacgggacagtagtacaaacgccacgggaaacagactggcagagatagacgagagctattt agagaagtttacagacttcttgaaattatttgtaagcattcatttgagacggttcgagtccaactccaagtttcctgttc tagaattcctaacactacttctaaaatacacttttaaacagcccacacatgagggattttataattgtttagacacatgg aatacattcctagactatttacattctaaacttcatgagagaggaagtgactcgttaagtctcaaaggaagataccaaga gggtcttctatcacttgtgtcgagtatgatgcagaagttacagtaccgctttaatcagtctcagctagaggaacttgacg atgaggtcctggatgatgactcggagacggagtggcaacagtttctacgacagagtttggaggtggtggctaaagtggca gaaatctacacggctgacacatttaggcttctgtatgaaccatttaatgaacagctagaggtgtacctgggtctggaaca gtttatccttaataatgcccagggtagacaactcactataacggcggaaaatgaatgtcgtaaacttcactgctctctaa gagacttatcatctctcattcaagctctgggaaggctagctgaacatttcataggggaaaaattccttgaaagatttgca gatggaacaatgctgatagagaggttggtacacactgttgtttatggatccaagtcacgattgtttgatgtcatgtcaac tatacagaatgtcctaccatctgattttgtagaagtaatgtattcaggattgagtcagtgtgattttatgacttgtcact gtcaatcctttgtcttttctcgttcacattccattgtctnacagtataatgccgaatctcagagagaagtacaggagaaa gccaagtttaagacccttataactaccctactgaattcactggtgccgctgttatctaaagaggtacagttactggtgta tagatccctatctaacagccttattcttccttggcctaatctgtctgacgcggaccaagattggacatctcgatctagtc accatcttacctttgtacagaaactagcacagtacttcttacagctcaaaaacactgcagcattaacagaaaataaggca ttacaagctgaagccaagcctgtaataaagaggaccttacaggtgtttgaggactggatagaggctgtagcaggggagat taacaagagtaaacaaatctgttatcagtctctacaagaagtcatacaagtagctctagcattgttccctgtgtacatca gtcaatcagagtccttgtattcttactacagatttttgaagatcttagagttgatagtccaggagcctggatcatcattc aaggcatttctaccacgtattatatctatatgtatggaccaaatctatcctattattgctcagaggccgtctccggacat taagtatgtattgtaccaccttctgcatgagttactgatgaacaactggaggtacttctttagaggatctgttcttctta cgctacaaaaacaggagacagagatgcagaatcctgaacagtttaaagccatcttagaggcctatggacagtcattcctt cagccagatttagcagtattcaaacacaatttagaatccttagaatccatcaattctaaatggaagctctaccataagcc gattttccagaacctgatgctgttccagtttttaaacgttttaatccaagtattagttcacaagtcacatgacctgctcc aagaggagatcgtagtttctgtatacaatatggcgtctgtggattttgacagattttatgcagaatttctgccgcatttt ctttcacaagttgatcgtcttgactctaatcaaaaggcagtattggctcagaattttgaaatggagagggatcttccatc cttcacaagtggtttacagagactagtcaatgatataaggtattatcgtctgatcaacagcagtagacccgagggatcat tcagcttttaa |
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Protein
| Protein ID | pfu_aug1.0_6888.1_52843.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6888.1_52843.t1 NLINRQWLGFPSQDKLEIRSTLNRFLLEHHDHVPSYIRNKLVKLVVDIGRIDWPHFYPDFFSSILQEFEDYLLQMFQQTF YLLQKLTRDSSTNATGNRLAEIDESYLEKFTDFLKLFVSIHLRRFESNSKFPVLEFLTLLLKYTFKQPTHEGFYNCLDTW NTFLDYLHSKLHERGSDSLSLKGRYQEGLLSLVSSMMQKLQYRFNQSQLEELDDEVLDDDSETEWQQFLRQSLEVVAKVA EIYTADTFRLLYEPFNEQLEVYLGLEQFILNNAQGRQLTITAENECRKLHCSLRDLSSLIQALGRLAEHFIGEKFLERFA DGTMLIERLVHTVVYGSKSRLFDVMSTIQNVLPSDFVEVMYSGLSQCDFMTCHCQSFVFSRSHSIVXQYNAESQREVQEK AKFKTLITTLLNSLVPLLSKEVQLLVYRSLSNSLILPWPNLSDADQDWTSRSSHHLTFVQKLAQYFLQLKNTAALTENKA LQAEAKPVIKRTLQVFEDWIEAVAGEINKSKQICYQSLQEVIQVALALFPVYISQSESLYSYYRFLKILELIVQEPGSSF KAFLPRIISICMDQIYPIIAQRPSPDIKYVLYHLLHELLMNNWRYFFRGSVLLTLQKQETEMQNPEQFKAILEAYGQSFL QPDLAVFKHNLESLESINSKWKLYHKPIFQNLMLFQFLNVLIQVLVHKSHDLLQEEIVVSVYNMASVDFDRFYAEFLPHF LSQVDRLDSNQKAVLAQNFEMERDLPSFTSGLQRLVNDIRYYRLINSSRPEGSFSF |
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