Gene
| Gene Model ID | pfu_aug1.0_6897.1_67587 |
|---|---|
| Locus | scaffold6897.1 : 1 ... 21039 : + |
| To GenomeBrowser | scaffold6897.1:1..21039 |
| Genes list of scaffold | scaffold6897.1 |
| Synonym | pfu_aug2.0_77.1_23385 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6897.1_67587.t1 | 1 | 1 | zf-tcix | 124 | 165 | 1.4e-21 | 75.5 | 6.9e-25 | 3.4e-21 | 74.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6897.1_67587.t1 | gi|291231753|ref|XP_002735818.1| | PREDICTED: uncharacterized protein C2orf42-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 2 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6897.1_67587.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6897.1_67587.t1 gacgatgtgcctggagatgtttggtgaggacactacagcggtggagagtgtaataccgtacagaggtgtcaaactctggt tcactctatggttcctgaggagagtcatacagaaagagacgtgggggcacggtatcggtcgtcacactccggacgaagtc tggtctatagctgtcggtgatatgacggccatatcagattttctaggtgagaagaagttctttatgggtgatgaaccatg tgaggtagattgtgcaatgtttggaatgcttaccatgattatttgcaacatgcctacgtcaaaacacgagcgcttcctca aagacaaacccagaatgacaacacctgataaactgaagactctgtttgaagatcttggtaaaccaaccttgcgtggagta agaaaatgtccaaaatgtggcacatataatgggacacgaggaattagttgtaaaaacaaggcttgtgacgtggtttttaa agagcgtgaaaagaagaaaggccatagtgctgatgctgtgaagatcataactggctctgcagttcaggttttttcagtac gcctacgtgacagaggtcctgattataggggctttgttcagcttccgttagttcaggatttagatggtaaccctgcacca gttgttgaccctgccattctgtctcaagctgctaggtgttatgtagatagttgtagcagaaataatcaactagggattca ggaggaggcgtgtcttcatatcaggtctgccatagaatgtgagcaggaagcacaacctcttacactcaaaaattctgtgc tcaattcattacaggtgtcaaatgacatgaagcaagcaatatggttgttagcaacagaaacctccgggccattagtgcaa cgagtaaccaaaaacataatggttgttaagtgtaaaccaagtcctaaacagccattgggatttcttcatttctctttctt tgaaactacaaggaacagagctcaaccagagcgcaagtttcagtgtacttgtagggcattcaagaataaacctggatcca aggatgagatttacaagagatgtgttcatttctacgcttgtgtgtgtgccttttctagtgacgagaaactgacggaagaa tttgatttttatataaacctggatatgaatgttcctatagtacaagagccaccttccccagagagacagattgtgaccat atatcaagatggaaaccttgacccgtcagaccagacaacccttgaggtggtagttacagacagtatcctaggacctcctg ctaaaaaacacaaaaaagacgatacactagtacaagccagtaatgctctacttactctacaggagggtaacttaccctct ccagccagtcctaagaaacctagtcccaataaacagagtcaaagcagagccacacctggtgctaaaaaggcagcctctg |
|
Protein
| Protein ID | pfu_aug1.0_6897.1_67587.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6897.1_67587.t1 TMCLEMFGEDTTAVESVIPYRGVKLWFTLWFLRRVIQKETWGHGIGRHTPDEVWSIAVGDMTAISDFLGEKKFFMGDEPC EVDCAMFGMLTMIICNMPTSKHERFLKDKPRMTTPDKLKTLFEDLGKPTLRGVRKCPKCGTYNGTRGISCKNKACDVVFK EREKKKGHSADAVKIITGSAVQVFSVRLRDRGPDYRGFVQLPLVQDLDGNPAPVVDPAILSQAARCYVDSCSRNNQLGIQ EEACLHIRSAIECEQEAQPLTLKNSVLNSLQVSNDMKQAIWLLATETSGPLVQRVTKNIMVVKCKPSPKQPLGFLHFSFF ETTRNRAQPERKFQCTCRAFKNKPGSKDEIYKRCVHFYACVCAFSSDEKLTEEFDFYINLDMNVPIVQEPPSPERQIVTI YQDGNLDPSDQTTLEVVVTDSILGPPAKKHKKDDTLVQASNALLTLQEGNLPSPASPKKPSPNKQSQSRATPGAKKAAS |
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