Gene
| Gene Model ID | pfu_aug1.0_6899.1_38427 |
|---|---|
| Locus | scaffold6899.1 : 10603 ... 33645 : - |
| To GenomeBrowser | scaffold6899.1:10603..33645 |
| Genes list of scaffold | scaffold6899.1 |
| Synonym | pfu_aug2.0_221.1_03812 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6899.1_38427.t1 | 3 | 1 | RNA_pol_Rpb2_6 | 135 | 156 | 0.0 | 298.8 | 3.5e-05 | 0.13 | 10.9 |
| pfu_aug1.0_6899.1_38427.t1 | 3 | 2 | RNA_pol_Rpb2_6 | 156 | 184 | 0.0 | 298.8 | 9.9e-09 | 3.7e-05 | 22.6 |
| pfu_aug1.0_6899.1_38427.t1 | 3 | 3 | RNA_pol_Rpb2_6 | 205 | 401 | 0.0 | 298.8 | 0.0 | 0.0 | 264.0 |
| pfu_aug1.0_6899.1_38427.t1 | 1 | 1 | RNA_pol_Rpb2_7 | 403 | 507 | 8.4e-21 | 74.0 | 1.1e-23 | 4.0e-20 | 71.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6899.1_38427.t1 | gi|350581976|ref|XP_003481167.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_6899.1_38427.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6899.1_38427.t1 agtttacaaaatgtgtcggataagtacatatttgatcagctggtcagaggaaaagaagatgactcattctacaagggatg tgtagtggccatgttacgacagctattaccagataaattaacatcacagagtaaagtgttagagtacatcggtaaacggt tccaggtcaaaatggggctgcctgaatgaaattgtgtatgcacccatttggaatcaaatgcagataaattcaacatactt gttcacatgactaggaagttatttgcgtttgctaagggtgagtgtgcggcagagagtgccgacaacccaatgttccaaga agtattattaggcggacatttataccttatggttctcaaggtgacaagtcacaaggagcttagtgaggtatccatgctgt ccactatagcatgcctgactccgttttctgaccacaaccaaagtcctaggaacatgtaccagtgtcagggttatgatatg gaggacgccatgatactaaacaaagcttcctttcagagaggatttggtcacggatcagtatacaagtcagagactgtctc actagtttattggaaaatcatctattacagttatgtaaacatacaaaccggagaagagaaagtagagaaatataaacacc aggaacctgcttatgtggacagtatcaaaattctcagtgatgatcaggggacaggggacctctcaaaagtctgttttgtt ctgagagttcagaggaatcctattatcggagataaattttctagtagacacggacagaagggaatctgtagtatgttatg gccagtagagagtatgccttactctgagagtggaatgacaccagacataatatttaatcctcatggattcccatctagaa tgaccataggtatgatgatagagagtatggcaggtaagtctgccgcgctacatggtttatgtcacgatgctacaccgttt agcttctctgaggaccagcccgctattgattactttggtcagatgctcactaaagctggttacaattactttggtacgga gcgtatgtacagcggggttaacggcagggagctggaggcagacatatttataggggtcgtttattaccagaggctgagac acatggtatcggataaatttcaggtgaggacaacaggccctatagatcaggtgacacatcagccgataaagggacgtaaa cgaggcgggggtatcagatttggagagatggaaagagatggtttaatatcacacggcacaaccttcctactacaagatcg actactcaattgctcagattcctcattggctcatgtatgtacagagtgtggtagtatactgtcacctttactggaaagac ctccgtcgtccgtagcagctgtctccgtggaaacgcagaggaaatggacatgttctgtttgtacccgtagtgatacgata caattaatcaaagtgccatatgtgttcagatacttgatagcagaactagccgctatgagcataaacgttgaactgaatgt taaaaaagtttga |
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Protein
| Protein ID | pfu_aug1.0_6899.1_38427.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6899.1_38427.t1 SLQNVSDKYIFDQLVRGKEDDSFYKGCVVAMLRQLLPDKLTSQSKVLEYIGKRFQVKMGLPEXNCVCTHLESNADKFNIL VHMTRKLFAFAKGECAAESADNPMFQEVLLGGHLYLMVLKVTSHKELSEVSMLSTIACLTPFSDHNQSPRNMYQCQGYDM EDAMILNKASFQRGFGHGSVYKSETVSLVYWKIIYYSYVNIQTGEEKVEKYKHQEPAYVDSIKILSDDQGTGDLSKVCFV LRVQRNPIIGDKFSSRHGQKGICSMLWPVESMPYSESGMTPDIIFNPHGFPSRMTIGMMIESMAGKSAALHGLCHDATPF SFSEDQPAIDYFGQMLTKAGYNYFGTERMYSGVNGRELEADIFIGVVYYQRLRHMVSDKFQVRTTGPIDQVTHQPIKGRK RGGGIRFGEMERDGLISHGTTFLLQDRLLNCSDSSLAHVCTECGSILSPLLERPPSSVAAVSVETQRKWTCSVCTRSDTI QLIKVPYVFRYLIAELAAMSINVELNVKKV |
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