Gene
| Gene Model ID | pfu_aug1.0_6900.1_67588 |
|---|---|
| Locus | scaffold6900.1 : 1 ... 4635 : - |
| To GenomeBrowser | scaffold6900.1:1..4635 |
| Genes list of scaffold | scaffold6900.1 |
| Synonym | pfu_aug2.0_125.1_16975 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6900.1_67588.t1 | 1 | 1 | Tetraspannin | 16 | 253 | 1.6e-34 | 119.0 | 1.3e-38 | 1.9e-34 | 118.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6900.1_67588.t1 | gi|170056427|ref|XP_001864025.1| | tetraspanin [Culex quinquefasciatus] | 9.99995e-41 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 2 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6900.1_67588.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6900.1_67588.t1 atggcgtcgggtgggtcccgccctgaccgcagtgctgtacagccatgtggaaaatacatcttgttcttctgtaattttct atttttattggtagggttaatggccttggctggaggagtatgggtccagacagagaaggagcagaaaacggtcaacagct tcgtggacatcctccttgacccctccatatcaatgatgctgattggaggaagtcttcttgtatttatcagcttctttggt tgctgtggtgctctcagagaaaataccatcttcatacgaatttactactacctggtgatgttttttctactgatacagat aatagccatagtgtttatatttctgttttacttccaaccccaaacactgacagatctgaacatctacccagagactgtac tcaaagacgccattgtcaactatagggacgatccggatcagcaggattttatagataatatgcagaaaacgattggttgc tgtggtatcagtaacgatgacaagggttataaagactgggccgccaatatctactttaactgttcttccggtagtgccga atcatgcgcagtaccatggtcatgttgtatacttaaggagggagaacctatcaacttactgtgtggaggaaacgcccaga gaagagagccctctgaattaacagatcagatttacactaaaggttgtcttaaaggattgggtgactggattggatccaat gttttcctgctggcagggattcttttaggtctactaataccacaa |
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Protein
| Protein ID | pfu_aug1.0_6900.1_67588.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6900.1_67588.t1 MASGGSRPDRSAVQPCGKYILFFCNFLFLLVGLMALAGGVWVQTEKEQKTVNSFVDILLDPSISMMLIGGSLLVFISFFG CCGALRENTIFIRIYYYLVMFFLLIQIIAIVFIFLFYFQPQTLTDLNIYPETVLKDAIVNYRDDPDQQDFIDNMQKTIGC CGISNDDKGYKDWAANIYFNCSSGSAESCAVPWSCCILKEGEPINLLCGGNAQRREPSELTDQIYTKGCLKGLGDWIGSN VFLLAGILLGLLIPQ |
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