Gene
| Gene Model ID | pfu_aug1.0_6917.1_60151 |
|---|---|
| Locus | scaffold6917.1 : 40916 ... 51525 : + |
| To GenomeBrowser | scaffold6917.1:40916..51525 |
| Genes list of scaffold | scaffold6917.1 |
| Synonym | pfu_aug2.0_356.1_20660 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6917.1_60151.t1 | 3 | 1 | UCH | 89 | 428 | 0.0 | 169.2 | 0.0 | 0.0 | 169.2 |
| pfu_aug1.0_6917.1_60151.t1 | 2 | 1 | UCH_1 | 89 | 386 | 1.1e-34 | 120.2 | 3.6e-37 | 1.3e-33 | 116.6 |
| pfu_aug1.0_6917.1_60151.t1 | 3 | 2 | UCH | 509 | 535 | 0.0 | 169.2 | 0.41 | 1500.0 | -2.0 |
| pfu_aug1.0_6917.1_60151.t1 | 2 | 2 | UCH_1 | 629 | 937 | 1.1e-34 | 120.2 | 0.0075 | 28.0 | 4.0 |
| pfu_aug1.0_6917.1_60151.t1 | 3 | 3 | UCH | 660 | 723 | 0.0 | 169.2 | 0.29 | 1100.0 | -1.5 |
| pfu_aug1.0_6917.1_60151.t1 | 1 | 1 | ubiquitin | 1018 | 1074 | 1.2e-07 | 30.9 | 7.9e-11 | 2.9e-07 | 29.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6917.1_60151.t1 | gi|326671953|ref|XP_002667675.2| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform X1 [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_6917.1_60151.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6917.1_60151.t1 atgccacctaagcagcagcttgacaaagcagcttggcaatgggcagaggtcacagactgggacaaagtcaacagtcaaca tatcaagatggcttatagactgaaccttcttccctgtggccaaggcgtttgtaaaagaaactgcaaggggaaccctttct gtatcaattgtctaggagagaaggtgtggtttggggaaatcagagaggacagttggcacgacattgaagacccaaatgaa gagagacgtacagaaagggcatttgtagggttgaagaacctaggagcaacttgttatgtcaatacttttcttcagttatg gtttcatagtccagagataaggagagccatctacaaatatagagagactgatattgctgcagattataacatcttagagg gatggaagccaagcagcataggtgggcacttacaagtcatatttgcacttttagacttttcagagagggcatacataagt cctcaggaatttataaatcacttgggactggatgccgccttgcagcaggatgctcaggaattctccaagttattcctgtc cttgcttgaggattcattatcacagcagaaagatccatctgtccgcaatgttatccagtctcagttctgtggtgaatacg cctatgtgacaacgtgcaaaaattgtggaaacgcatctcatcgtccgtctaagttttatgaacttgacctgcatatcaaa ggtcacaaaacgttagaagattcaatcacagaatttttgcaagaggaaaaattggatggcaacaataagtacatgtgttc acactgttgtagcaagcaagacgcagcacgggccattcagttgaaacaacttcctcctgtgttaaatattcagcttctcc ggtttgttttcgatatgaaaagtggacagaagagaaagctgaatagcttcatacaatttccagaggtcctagacatgagc cctttcctacaaaggaaagagactgggagtgtaaatggtgaaacaagtcgggaaacggatgacaactcaatgtcagccaa gtataacctacgagccgtgcttattcacagagggccatctgcctatagcggtcattatatagcacacatcaaggacatga agcaagggccttggtaccgatttaatgacgaggaaatcaagaaaatgaagggagccagtcttcacctgggtactgaggaa gatttggaggagaacgctaataaacagaaaggaagggtgccgaaggggtaccattcatcaaggaatgcttatatgttggt ctacacaaaagccagtggtaaagttgacgaaaaagagattacgtctgagaattttgtgttgaatgacaaggaaacgtcag ataccgacaaaaagatggagatagacaaccaggagagtatgacgaacaacactaacggggaaaatctgtccgagaaaaat cttttaccagaatatgttcataaatatgttgaagaagacaacaataagtttgagatgtggattgcagaaatgataatgat gcgagatcagaacatcgagaatggaaaagaaaagcaagaggaagtaaaaacaaattttaagaaattgtttgtggacagta gtaagcaagctgagggggattttgaatggatttgtccaaaatggatttcaaagtggcttgcggaaccgtcaaaagcacca gcaattgataactcaaattatctctgtccacacaagaaacttgacccagattgtgcggtaaagttgaaatgcgtgagtgt aaaaggtgcagacattctctatgacaagtattctggaggtccacgattacctggtgaaaagtcaacttgtttgatttgtg tgggaaatcgatgtagaattatacgtacaaaacaaaagatgcatgaggatgacaagatgtttagttgcatgaaaaaggac gtgaatccaatggaagaaaaatgctactgggtcggaaaatcttcgatgcgaagttggaagaggctagttcttgagcagat tgaagaaatggcagcagcggagagaaagcagcaaaactacaatagacatacaatgtccgaaagtgaactggaagatcagg atatggacaaagatgagaaagaaattaacggagatctcactgactgtccgcaggaaaggcgagatgctgaaaattacaat cttaatgaggagctcagtagtaaaaatgagagtatggagcttgttttgcagttcaatgaagatcttttgtgtcagtatca tggagatttagatccagatgtatcctgtcggaaacttattcctgaaaaaatatggaatcggctgaaagaatatttcccga attgtccggagtatgaaagtgatgctccagtttgttcaaagtgctgcacattgattcaagtggatcaagaaaataaagat gtgaataaacgactggcagcagcacagaaacaggtactgggagatttatttaatgacagaaaacgtccgcaaaagttcgt tcttggtcaggaattgaatgtcgttagtgcttcatttgtagaagaatggcggaaattcatacgggatcctttgaagaatt ctccagtgtcagaagtgtcaaacattatactgctttgtaaacatgacgggtatgtgcacccaccgacggaaaatccccct gagctttcaaacacaagcgttgtttacgtttggccgacggaatgggatattatctgtcaaaacttcatcgtagattttga aatttctgtagtgccatatcaagctgaagacagactacaatttgcaactttacctgacatttgtaaagattgtgtgaatg caagaaacaatgaaatggaaatggcaaaatacgaatacaaagacgctactgtttacgtcagaaaaattccaaaggagtca aagtcaaagaacaacagtatttcggagggcaattcgagcaaagaggacgatccagagtatatgcagttaggaaatttatc agatctcgaggaaccaccagacaaaatgttcaaacttgacaacggagttcgtcgcaaaagttccagacatagaaaggtca gaggtgaaaaggaggtgaaggtctcatcaacacagactttaaaagacttaaaacttcaaataatgaagctattttcagtt cctccatttgatcagaacttgttcttggatggcattgcactgaaagacaatgcaacaacacttagtgaactgagggtagc tccaggggctataattctgcttcaagcagatgaacctgaggaggatcctggggtgttacaggattggatccaagtttcag gtgggccagaagaaggtttcaagggtacagggcttctcagccattcttga |
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Protein
| Protein ID | pfu_aug1.0_6917.1_60151.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6917.1_60151.t1 MPPKQQLDKAAWQWAEVTDWDKVNSQHIKMAYRLNLLPCGQGVCKRNCKGNPFCINCLGEKVWFGEIREDSWHDIEDPNE ERRTERAFVGLKNLGATCYVNTFLQLWFHSPEIRRAIYKYRETDIAADYNILEGWKPSSIGGHLQVIFALLDFSERAYIS PQEFINHLGLDAALQQDAQEFSKLFLSLLEDSLSQQKDPSVRNVIQSQFCGEYAYVTTCKNCGNASHRPSKFYELDLHIK GHKTLEDSITEFLQEEKLDGNNKYMCSHCCSKQDAARAIQLKQLPPVLNIQLLRFVFDMKSGQKRKLNSFIQFPEVLDMS PFLQRKETGSVNGETSRETDDNSMSAKYNLRAVLIHRGPSAYSGHYIAHIKDMKQGPWYRFNDEEIKKMKGASLHLGTEE DLEENANKQKGRVPKGYHSSRNAYMLVYTKASGKVDEKEITSENFVLNDKETSDTDKKMEIDNQESMTNNTNGENLSEKN LLPEYVHKYVEEDNNKFEMWIAEMIMMRDQNIENGKEKQEEVKTNFKKLFVDSSKQAEGDFEWICPKWISKWLAEPSKAP AIDNSNYLCPHKKLDPDCAVKLKCVSVKGADILYDKYSGGPRLPGEKSTCLICVGNRCRIIRTKQKMHEDDKMFSCMKKD VNPMEEKCYWVGKSSMRSWKRLVLEQIEEMAAAERKQQNYNRHTMSESELEDQDMDKDEKEINGDLTDCPQERRDAENYN LNEELSSKNESMELVLQFNEDLLCQYHGDLDPDVSCRKLIPEKIWNRLKEYFPNCPEYESDAPVCSKCCTLIQVDQENKD VNKRLAAAQKQVLGDLFNDRKRPQKFVLGQELNVVSASFVEEWRKFIRDPLKNSPVSEVSNIILLCKHDGYVHPPTENPP ELSNTSVVYVWPTEWDIICQNFIVDFEISVVPYQAEDRLQFATLPDICKDCVNARNNEMEMAKYEYKDATVYVRKIPKES KSKNNSISEGNSSKEDDPEYMQLGNLSDLEEPPDKMFKLDNGVRRKSSRHRKVRGEKEVKVSSTQTLKDLKLQIMKLFSV PPFDQNLFLDGIALKDNATTLSELRVAPGAIILLQADEPEEDPGVLQDWIQVSGGPEEGFKGTGLLSHS |
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