Gene
| Gene Model ID | pfu_aug1.0_6939.1_45539 |
|---|---|
| Locus | scaffold6939.1 : 8700 ... 16225 : - |
| To GenomeBrowser | scaffold6939.1:8700..16225 |
| Genes list of scaffold | scaffold6939.1 |
| Synonym | pfu_aug2.0_130.1_00295 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6939.1_45539.t1 | 2 | 1 | SAM_PNT | 122 | 197 | 6.5e-14 | 51.4 | 7.3e-17 | 5.4e-13 | 48.5 |
| pfu_aug1.0_6939.1_45539.t1 | 2 | 2 | SAM_PNT | 363 | 378 | 6.5e-14 | 51.4 | 0.085 | 630.0 | 0.2 |
| pfu_aug1.0_6939.1_45539.t1 | 1 | 1 | Ets | 367 | 452 | 7.3e-21 | 74.1 | 2.0e-24 | 1.5e-20 | 73.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 2 |
| mantle | 2 |
Transcript
| Transcript ID | pfu_aug1.0_6939.1_45539.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6939.1_45539.t1 atggaatgcataatgcgtacaacaagaggaatcatggaacctatcagttataagtatgtggtgaagcatgagtctttctt agacgaagaacaattatccattttcagatctgccttgaatgatatagacttcattgaggaagataactcattctgtactg acgatttagaccttagtgactgggaaagcgagaattcaacattatcttcagacgatataattgatatggcatcagtctgc gtaccacaatcgattccagaaacattgtcaaacgatataagcgattccgaaatgagtttttaccccgaaggagacatgaa accctgcatgcaagaaatcctgagtcccgtacagaccgacatgctcagctggacacagcaacatccattcaactggaaca ccatccaggtattggattggatctactatgttgctgaggctttgggtatggacgtggccgaactgagaggagagagcttc cagaatattaacggacaacaactgtgtagaatgagcaaggaagacttctgtaacaaagaccagaaatatggatcacagtt ccacgaaaacttgaccaaacttatcacagattctacatttattgaaccatcaccagtcgattatagcgctgattgtggtg gtcagtttgccgagctggtcagcgctctcacaaacaatgatgaagaaatccacaaaatgcttgataagaatattgagatt ttggaaagaaaagtcaatcctaccaatggctgtcagtcatacaacatcctaggagcatggtatgatatcgatgacagtat ggacttcccaatggatccatcagctgattctggatatattagtggagattcctgtgacggtcacagtatccctgactgca taaccgattcccctgtgttctccgaggcagaggaggcagcattccccgttaccgtggagtccccaaatcccgaggctcca aatcccgtcaaaaagaagagcaggaaacgtaactcttccagtatctcaactgatagcggtgttggtgacggagaggaggg aagtgagagaaagaaaggcaaccgcggcagaaaagttggtcaatcctcaaaaggaaaccatctttgggaattcattagag atctacttaaaaattcaaacttcaatcccactctcctgcgctgggaggataaagaagctggagtgttcagatttgtccaa tcagaggccgtggctcaaatgtggggtcgtcaaaagaacaacacgaccatgacctacgagaaactcagccgagcaatgag gttttgccggacagctggctattttgcagatgttcccaaaaacggcaaattcccaaagaagctctgctttaaatttggac caaaggcttttggttggcgcgacatgtag |
|
Protein
| Protein ID | pfu_aug1.0_6939.1_45539.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6939.1_45539.t1 MECIMRTTRGIMEPISYKYVVKHESFLDEEQLSIFRSALNDIDFIEEDNSFCTDDLDLSDWESENSTLSSDDIIDMASVC VPQSIPETLSNDISDSEMSFYPEGDMKPCMQEILSPVQTDMLSWTQQHPFNWNTIQVLDWIYYVAEALGMDVAELRGESF QNINGQQLCRMSKEDFCNKDQKYGSQFHENLTKLITDSTFIEPSPVDYSADCGGQFAELVSALTNNDEEIHKMLDKNIEI LERKVNPTNGCQSYNILGAWYDIDDSMDFPMDPSADSGYISGDSCDGHSIPDCITDSPVFSEAEEAAFPVTVESPNPEAP NPVKKKSRKRNSSSISTDSGVGDGEEGSERKKGNRGRKVGQSSKGNHLWEFIRDLLKNSNFNPTLLRWEDKEAGVFRFVQ SEAVAQMWGRQKNNTTMTYEKLSRAMRFCRTAGYFADVPKNGKFPKKLCFKFGPKAFGWRDM |
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