Gene
| Gene Model ID | pfu_aug1.0_694.1_15186 |
|---|---|
| Locus | scaffold694.1 : 9 ... 11965 : - |
| To GenomeBrowser | scaffold694.1:9..11965 |
| Genes list of scaffold | scaffold694.1 |
| Synonym | pfu_aug2.0_443.1_10785 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_694.1_15186.t1 | 1 | 1 | Aminotran_1_2 | 21 | 215 | 5.1e-25 | 88.1 | 4.0e-29 | 6.0e-25 | 87.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_694.1_15186.t1 | gi|50732479|ref|XP_418654.1| | PREDICTED: 1-aminocyclopropane-1-carboxylate synthase homolog-like isoform X2 [Gallus gallus] | 5.0e-39 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_694.1_15186.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_694.1_15186.t1 atggagtatcattatcggagagtttggaggcctcttataccaaagcacaatctgagatgtagcttacacgtagtgatgga tgagatctatggactctcggtattcggggaaagtaaatttgagagtgtttttactttggatatgatccctgatccggaaa ggacacattttatgtggggactgagtaaggattttggcatgtctggttatcgtataggagttcttcacagttggagtaag tcgtttatacaatatgtacggaggattatcgatgccttccaagtaccgacctttatacaactacaaattaacaccttcct atcagatattgactggatagataacgtcctcttacgtacttaccaagacaaacttagatccagtttccagtacaccaaag aaaagttgtcagccatggatgtgtcagtacatcctaaatgccaaggagggctttttgtctgggctaatttctcaaagcac atgaaaagtaagtcttttgaagaagaagaaaaacttatggcaaagttatatacatcgggagtgtcagtactgaatggagg atcctttaaaagttccgaacctggatggtttagaatcatatttactactcgtccacatttactagaagaagctttaaaca gaattgaggtagcattaaaacagagctga |
|
Protein
| Protein ID | pfu_aug1.0_694.1_15186.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_694.1_15186.t1 MEYHYRRVWRPLIPKHNLRCSLHVVMDEIYGLSVFGESKFESVFTLDMIPDPERTHFMWGLSKDFGMSGYRIGVLHSWSK SFIQYVRRIIDAFQVPTFIQLQINTFLSDIDWIDNVLLRTYQDKLRSSFQYTKEKLSAMDVSVHPKCQGGLFVWANFSKH MKSKSFEEEEKLMAKLYTSGVSVLNGGSFKSSEPGWFRIIFTTRPHLLEEALNRIEVALKQS |
|