Gene
| Gene Model ID | pfu_aug1.0_6948.1_24111 |
|---|---|
| Locus | scaffold6948.1 : 9536 ... 24243 : + |
| To GenomeBrowser | scaffold6948.1:9536..24243 |
| Genes list of scaffold | scaffold6948.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6948.1_24111.t1 | 1 | 1 | Arf | 30 | 166 | 5.5e-06 | 25.7 | 8.3e-09 | 8.8e-06 | 25.0 |
| pfu_aug1.0_6948.1_24111.t1 | 1 | 1 | Miro | 36 | 151 | 2.7e-19 | 69.8 | 4.3e-22 | 4.5e-19 | 69.0 |
| pfu_aug1.0_6948.1_24111.t1 | 1 | 1 | Ras | 37 | 192 | 8.5e-29 | 100.0 | 1.5e-31 | 1.6e-28 | 99.1 |
| pfu_aug1.0_6948.1_24111.t1 | 1 | 1 | MMR_HSR1 | 37 | 130 | 8.7e-08 | 32.1 | 2.1e-10 | 2.2e-07 | 30.8 |
| pfu_aug1.0_6948.1_24111.t1 | 1 | 1 | GTP_EFTU | 69 | 175 | 8.1e-08 | 31.9 | 3.3e-09 | 3.5e-06 | 26.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6948.1_24111.t1 | gi|242001386|ref|XP_002435336.1| | GTP-binding protein Rhes, putative [Ixodes scapularis] | 1.0e-21 |
Transcript
| Transcript ID | pfu_aug1.0_6948.1_24111.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6948.1_24111.t1 atgaattacctgaaagtatggggagattcaatgaaacaattcagacgatctttgtcttcgtctacaaatagaagtagtgg aagcacctcggaggatcggcttctacgcctggccgtgcttggtgcatctaaggtaggaaaatcatccttgatcaaacaac ttttgaaacaaaaagttgatgacgcctacgaggagacgatagaggacttgtacaagtacacctcatccaaggacccggac cttcaagtagacatcctagacacatcgggctccgatgagtacctgtctttccgtaaacgagctatgaagaattacgattg tttcctcttggtattttctttacttgacgagtcatcgttcgaagagatgaagaaaatcagagaccagttgtacaccgtga gaagaaaacgcacctctcctttcccacttttggtggtcggcaacaaatgtgatcaaccatggagattcatgtctaaagac aatatagagtcggttgtcggagaactaggtcacgagtatatggagtgctcagcaaggtgctttgatgacacgaagataag ttttgagagaatcatagatttgagcgacactgatgacgtctttgctggacaggcgggctatttaggaggggtgcatgatg gatctatatttgtaaagaggatacgaaatatcaacgccgattatgtttacaccaatcgaatgctgcattacataaatgaa atgaacctcatccggtatgctagagcatgtactgatgttttggattttcatagtagaaatttacaaattaccgatgagtt aaagaagatcctgacgataatctcaacagcactcacaattgagcgccaaattgagcatcgacggaccccttgcaagctag aggtgggaccaggtgcccaggaggaatataagagacctattcgaaatttcgtttttaactacaacaaagttacacaagat cctaaaatacttgaatcatgtcctgcttcttga |
|
Protein
| Protein ID | pfu_aug1.0_6948.1_24111.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6948.1_24111.t1 MNYLKVWGDSMKQFRRSLSSSTNRSSGSTSEDRLLRLAVLGASKVGKSSLIKQLLKQKVDDAYEETIEDLYKYTSSKDPD LQVDILDTSGSDEYLSFRKRAMKNYDCFLLVFSLLDESSFEEMKKIRDQLYTVRRKRTSPFPLLVVGNKCDQPWRFMSKD NIESVVGELGHEYMECSARCFDDTKISFERIIDLSDTDDVFAGQAGYLGGVHDGSIFVKRIRNINADYVYTNRMLHYINE MNLIRYARACTDVLDFHSRNLQITDELKKILTIISTALTIERQIEHRRTPCKLEVGPGAQEEYKRPIRNFVFNYNKVTQD PKILESCPAS |
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