Gene
| Gene Model ID | pfu_aug1.0_6953.1_02350 |
|---|---|
| Locus | scaffold6953.1 : 2729 ... 37235 : - |
| To GenomeBrowser | scaffold6953.1:2729..37235 |
| Genes list of scaffold | scaffold6953.1 |
| Synonym | pfu_aug2.0_95.1_16904 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6953.1_02350.t1 | 1 | 1 | FYVE | 558 | 618 | 3.7e-16 | 58.7 | 2.0e-19 | 9.8e-16 | 57.4 |
Transcript
| Transcript ID | pfu_aug1.0_6953.1_02350.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6953.1_02350.t1 atggtggagagtggttgtagtaagctggcctatcagatagatctcattcagtggtgcctagagaaaaccaatggttcgtt caacagtgataatttccaagaagaatacaagaaaaatgttatagaaaagctcaaactggcgaaagagtatttatcgagat tacaacctttgacttacagagtagaggtgctggagaatttgttctcccttttatttgcgacgcatgagaatattcaggac acagtgtgtgatgtagagtctgatagcagtgaccttgaacctgatgaggaggaaaggtcaaggtcagatactgttgccgt caacgatcagacagtgagttctgttttggaggacagtctttcaccgacttcacccatagaaatggatttgaaggagacat gttctgttgaaagttcttcgacatcaatatttgcttatgacgagccatttcctgaaccggtagatgtaccaaaatcaagg aaaaggtcaacatcactcacagagtatctagtctcacagaaaagggaaacagctcaaatgtcacggctgaatcaaataaa atcagaggaaactttacaaagaggttcagggaatggcagtgccctcagtggagacagtacatgcagctacctgaagtttg gtttactctgtaacgagtatttaatccgagacatcttaacaatgatcaaagattgcatgactgaccttaatattgcgaga attcaggtcaaaggtcaaaagacagacaggactacggccaatctacctttatcacagacagagtgtatttcctacgccac tctgataacagaagtgaaacgagccatggagaaagtagagcacacatttcaactacatggtaggatgcctttggagggga atgcttcaagttccggaccatcagtgaacagagagtatttacagagtctgtacgatcatctcaagagactggcttttgtg gtgatggaaagtgaaggtggatctaaagaactcgtcatcattgctgagatttacatatacctttgtatgaatctcttgca tcaaattgcagttgaaaactccagtggtgatgggcaaagtgttactacagtgcatgtacagacagagagatcagagttgt cagtccatcctgagaagtatgtacggcacatactcactaagctcttacatcttatgagagtcttcaaggaagataatgtg atagataaatgtccagagaccaaactttactcagagatgtcaactctacaacaggttctacaacttagattgttcatgta tgacgtagggcagcttggcaaaataagtttatttgatgtgaagtacataatgaatcacagtggtctccctccacccacag agtttgatggtattctctcaagcagaatttatgagaagagcagaagtcagtcggaggtttcaaactcttcatcagacaaa gctacagacagaggcacaccagatcctaatcagagcttaacggatcatacacgtacaccgaagagactcagtcttaccga gtctgtcaggcttaaacccagtacagagtatactggtgggaggtttcttccacaaactccaacacccagtccaattcctg aacctaactccctaaggtcagaaaaggggacaagtacatttatgatgccagctgagccaccatcaaaagataaatggcag cctgatgcatcaacacatgtgtgtatggtgtgtaaagtggaaaagttcagtatgtttaatcgtcgccaccattgccgtag atgtggaagagttgtctgtgcttcctgttcaacaaaaacatctctgatccacggagtgttggctagaacatgtgatgact gctactcacaaatatataacttaagtaagacggagactgatgtatacaggacgtttatcggaggagataatttgtctgca gcgagtgtgtcgtcacgagcgtttagtcccagtccgggagttcatagcatgctgaatgatggctctagtgtgaaaatccc atacgtaaactcagctcattttgtatggaagctcaaagctgacacttcagagcataatgaaattacaagggaagaattct attatgagcagccccagcaggacaagaaccaggtgacctccatgtctaagcctctgagggacatcatagattatcttgag atgatgccagcagctggaccaagccagttacacctgctgatgaccaagaagctgacctggcaggacttgttagccacaca tgtttcagtttctgaggactgcctctccgactccttacagttccaggaatgtttattttatctgaagacctacggagcat acagtcacgtgattgactttcatcgaaggaatggacggtggatgaaagctgtacaatttctgttagataagttaaaagag gcagagaacttcatcaagctgctacgaaaggattcaaataagagatgtacgtctgaggtgtatatggagtcgttattgat accggcattaagtaacggagaactactgaagctaacagaccagatggtgatgatagatccgacactggagaaatggcatc tatacctcacagctacgtgtcgtcatctactgaaatataaatatcacaacatgctgtacgagttccaactctttatgaag gaataccgtttaggaagtggtaccattttcacacacgtagcccgagagatggccaagcaccaacgataccaccatgtccg gcagctgttagactgtgtaagacgtgtcggcctcggtgacgacgataccatggatgagatactaggggcgtgtatactcg ttattgcagacaaaccaagcgagatcaatgcgtatattctatgtgggaagttaagatctgcctacctgatggcggtgaag gcagagcgtgtagaagacgtacagaggatagccggagccgcacagaggatgggacaaacggcagtcagaactatatgtaa taaatggctggaacaacgaaagtctgagcagtcttga |
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Protein
| Protein ID | pfu_aug1.0_6953.1_02350.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6953.1_02350.t1 MVESGCSKLAYQIDLIQWCLEKTNGSFNSDNFQEEYKKNVIEKLKLAKEYLSRLQPLTYRVEVLENLFSLLFATHENIQD TVCDVESDSSDLEPDEEERSRSDTVAVNDQTVSSVLEDSLSPTSPIEMDLKETCSVESSSTSIFAYDEPFPEPVDVPKSR KRSTSLTEYLVSQKRETAQMSRLNQIKSEETLQRGSGNGSALSGDSTCSYLKFGLLCNEYLIRDILTMIKDCMTDLNIAR IQVKGQKTDRTTANLPLSQTECISYATLITEVKRAMEKVEHTFQLHGRMPLEGNASSSGPSVNREYLQSLYDHLKRLAFV VMESEGGSKELVIIAEIYIYLCMNLLHQIAVENSSGDGQSVTTVHVQTERSELSVHPEKYVRHILTKLLHLMRVFKEDNV IDKCPETKLYSEMSTLQQVLQLRLFMYDVGQLGKISLFDVKYIMNHSGLPPPTEFDGILSSRIYEKSRSQSEVSNSSSDK ATDRGTPDPNQSLTDHTRTPKRLSLTESVRLKPSTEYTGGRFLPQTPTPSPIPEPNSLRSEKGTSTFMMPAEPPSKDKWQ PDASTHVCMVCKVEKFSMFNRRHHCRRCGRVVCASCSTKTSLIHGVLARTCDDCYSQIYNLSKTETDVYRTFIGGDNLSA ASVSSRAFSPSPGVHSMLNDGSSVKIPYVNSAHFVWKLKADTSEHNEITREEFYYEQPQQDKNQVTSMSKPLRDIIDYLE MMPAAGPSQLHLLMTKKLTWQDLLATHVSVSEDCLSDSLQFQECLFYLKTYGAYSHVIDFHRRNGRWMKAVQFLLDKLKE AENFIKLLRKDSNKRCTSEVYMESLLIPALSNGELLKLTDQMVMIDPTLEKWHLYLTATCRHLLKYKYHNMLYEFQLFMK EYRLGSGTIFTHVAREMAKHQRYHHVRQLLDCVRRVGLGDDDTMDEILGACILVIADKPSEINAYILCGKLRSAYLMAVK AERVEDVQRIAGAAQRMGQTAVRTICNKWLEQRKSEQS |
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