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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6955.1_38441
Locus scaffold6955.1 : 46796 ... 50727 : +
To GenomeBrowser scaffold6955.1:46796..50727
Genes list of scaffold scaffold6955.1
Synonym pfu_aug2.0_300.1_00570

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_6955.1_38441.t1 gi|270008743|gb|EFA05191.1| hypothetical protein TcasGA2_TC015324 [Tribolium castaneum] 1.0e-18

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-4cell 1
8-16cell 1
egg-Dshape 1
trochophore 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_6955.1_38441.t1
Definition-
>pfu_aug1.0_6955.1_38441.t1
atgtcattgaggatctccgcaaaaagcagaaaaaagtggaaaaatgctcctaggctgacgctacaggtcagtaagactga
attgaaaatttcacaagatgtagaagaacgaaagaaaaaagaaaagaaaatcagaactgtcaaatttccggtcattccgt
caagagatattacgtatgttatgcaggctcggcacccattaacgggccaaccagatgatattgtagcgtgtatatacctc
gggtacgtacccagaacacgtcggtacgtacatgttcacgtgtatagatttgactgtgcggagactgccacaaaatatgt
ccgcttcctgaggcacacaatcgccgactatagcgaacgactgaacagaatcgaaatggaactaatcagcaagggtgaaa
tcgaggacccacgtgtgacgaatatgaacttcatgatgaacagtggtatgagacagagtccgagggatcccggcctcggc
tcttcggacggaatgagtgaaccacacacagattcctacccagattccggggctagcacatacagcgggtctttaccgtc
agatgaaatcgaaccagacatgatcagtctgaaagaccaaatgccgttcgactccgtcaccgaggaactgaagataaagc
tgggaatgacaacgaagaaagagggcgctcctctgttgttaccaccaaaggactatgatacaatacgcaggaagcaaggt
aacctagaaaaagtagatcttcggcggagtctgaacgtcaacatcgtaggtgagtcggcttggactccgagaccgagaaa
taaatcagaggaaagcggcgtggaactaccctcaccatcagagggatctgaatcagaaccgaagttccccgatctaggat
atgagggaaatgacgtatcaacgattcctgaacttccagaacaagacccgatgatgtatcctccgcagacggcgagaagt
ccccgaatctctcgggtcatgcacgaaaaagacttaatgagagtaccgtcattttcatcggcttatagctctcatagcta
cagaagtgctacttcttctacttccaacgggtacccggaagtggagaacgccgtcatatacaccggaaggaaacaggatg
ccgaaattccgcctgcagattacgaggattccgatccgttcattcacggtaaagaaaatcattgggacagtagagacttc
aataagagcatgcccgcaaatatgttccctcgcggtgttcccgaatacgcagtaatcaacaagaagcgtgccacatcgac
aaacactcccccttccaaatataatatggacttgtactctccgcggggaaacgacgctcgaattcggcgagtcaattcta
tgtacaaatga

Protein
Protein IDpfu_aug1.0_6955.1_38441.t1
Definition-
>pfu_aug1.0_6955.1_38441.t1
MSLRISAKSRKKWKNAPRLTLQVSKTELKISQDVEERKKKEKKIRTVKFPVIPSRDITYVMQARHPLTGQPDDIVACIYL
GYVPRTRRYVHVHVYRFDCAETATKYVRFLRHTIADYSERLNRIEMELISKGEIEDPRVTNMNFMMNSGMRQSPRDPGLG
SSDGMSEPHTDSYPDSGASTYSGSLPSDEIEPDMISLKDQMPFDSVTEELKIKLGMTTKKEGAPLLLPPKDYDTIRRKQG
NLEKVDLRRSLNVNIVGESAWTPRPRNKSEESGVELPSPSEGSESEPKFPDLGYEGNDVSTIPELPEQDPMMYPPQTARS
PRISRVMHEKDLMRVPSFSSAYSSHSYRSATSSTSNGYPEVENAVIYTGRKQDAEIPPADYEDSDPFIHGKENHWDSRDF
NKSMPANMFPRGVPEYAVINKKRATSTNTPPSKYNMDLYSPRGNDARIRRVNSMYK

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