Gene
| Gene Model ID | pfu_aug1.0_6960.1_52854 |
|---|---|
| Locus | scaffold6960.1 : 4493 ... 13515 : - |
| To GenomeBrowser | scaffold6960.1:4493..13515 |
| Genes list of scaffold | scaffold6960.1 |
| Synonym | pfu_aug2.0_4431.1_05997 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6960.1_52854.t1 | 8 | 1 | GED | 9 | 43 | 5.9e-07 | 29.3 | 0.11 | 150.0 | 2.3 |
| pfu_aug1.0_6960.1_52854.t1 | 5 | 1 | MgtE_N | 14 | 81 | 2.1e-12 | 47.2 | 0.0014 | 1.9 | 8.8 |
| pfu_aug1.0_6960.1_52854.t1 | 8 | 2 | GED | 49 | 90 | 5.9e-07 | 29.3 | 0.0034 | 4.6 | 7.2 |
| pfu_aug1.0_6960.1_52854.t1 | 5 | 2 | MgtE_N | 84 | 157 | 2.1e-12 | 47.2 | 0.00056 | 0.75 | 10.1 |
| pfu_aug1.0_6960.1_52854.t1 | 8 | 3 | GED | 96 | 117 | 5.9e-07 | 29.3 | 0.72 | 970.0 | -0.3 |
| pfu_aug1.0_6960.1_52854.t1 | 8 | 4 | GED | 129 | 162 | 5.9e-07 | 29.3 | 0.067 | 90.0 | 3.0 |
| pfu_aug1.0_6960.1_52854.t1 | 8 | 5 | GED | 149 | 201 | 5.9e-07 | 29.3 | 0.0079 | 11.0 | 6.0 |
| pfu_aug1.0_6960.1_52854.t1 | 1 | 1 | DUF445 | 154 | 358 | 1.5e-06 | 28.0 | 1.2e-07 | 0.00017 | 21.2 |
| pfu_aug1.0_6960.1_52854.t1 | 5 | 3 | MgtE_N | 157 | 224 | 2.1e-12 | 47.2 | 0.012 | 16.0 | 5.9 |
| pfu_aug1.0_6960.1_52854.t1 | 8 | 6 | GED | 222 | 259 | 5.9e-07 | 29.3 | 0.0087 | 12.0 | 5.9 |
| pfu_aug1.0_6960.1_52854.t1 | 5 | 4 | MgtE_N | 247 | 288 | 2.1e-12 | 47.2 | 0.0027 | 3.6 | 7.9 |
| pfu_aug1.0_6960.1_52854.t1 | 8 | 7 | GED | 261 | 294 | 5.9e-07 | 29.3 | 0.14 | 190.0 | 2.0 |
| pfu_aug1.0_6960.1_52854.t1 | 5 | 5 | MgtE_N | 288 | 355 | 2.1e-12 | 47.2 | 0.00032 | 0.43 | 10.9 |
| pfu_aug1.0_6960.1_52854.t1 | 8 | 8 | GED | 300 | 334 | 5.9e-07 | 29.3 | 0.048 | 64.0 | 3.5 |
Transcript
| Transcript ID | pfu_aug1.0_6960.1_52854.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6960.1_52854.t1 atgatcaaccatgtaactgatgacgtcacaggtcacatgaccaaccacgtgaccgatgacgtcaaaggtcacctgaccaa ccacgtgaccgatgacgtcacaggtcaaatgatcaaccacatgactgatgacgtcataggtcacctgaccaaccaagtga cctatgacgtcaaaggtcacatgatcaaccaagtgactgatgacgtcacatgtcatatgaccaaccacgtgaccgatgac gtcacaggtcacatgatcaaccaattgacctatgacgtcacaggtcacatgaacaaccacgtgaccgatgacgtcacagg tcaaatgatcaatcacatgactgatgacgtcacaggtgacctgaacaaccacgtgactgatgacgtcgcaggtcaaatga tcaatcacgtgacttatgacgtcacatgtcacctgaccaaccacgtgacctatgacgtcacaggtcacatgatcaaccac gtgactgatgacgtcacaggtcacctgaccaaccacgtgaccaatgacgtcacaggacacatgatcaacaacgtgactga tgacgtcacaggtcacctgaccaaccacatgactgatgaggtcacatgtcacatgaccaaccacgtgactgatgacgtca caggtcacctgaccaaccacgtgactgatgacgtcacaggtcacctgaccaaccacgtgactgatgacgtcactagtctt atgatcaaccatgtgactgatgacgtcacagatcacatgaccaaccacgtgaccaatgacgtcacaagtgacatgaccaa ccatgtgaccaatgacgtcacaagtcacatgaccaaccacttgactgatgacatcacaggtcacatgaccaaccacgtga ctgatgacgtcataggtgacatgacgaatcacgtgaccaatgacgtcacaagtcacataaccaaccacgtgaccgatgac gtcacagatcacatgacaaaccacttgactgatgacgtcacaatcgacatgaccaaccatgtgaccaatgacgtcacaag tcacatgaccaaccgcatgactgatgacgtcataggtcacatgaccaaccatgtgactgatgacgttacaagaccaacta caccaaggtcacatgacctatgcaactattga |
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Protein
| Protein ID | pfu_aug1.0_6960.1_52854.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6960.1_52854.t1 MINHVTDDVTGHMTNHVTDDVKGHLTNHVTDDVTGQMINHMTDDVIGHLTNQVTYDVKGHMINQVTDDVTCHMTNHVTDD VTGHMINQLTYDVTGHMNNHVTDDVTGQMINHMTDDVTGDLNNHVTDDVAGQMINHVTYDVTCHLTNHVTYDVTGHMINH VTDDVTGHLTNHVTNDVTGHMINNVTDDVTGHLTNHMTDEVTCHMTNHVTDDVTGHLTNHVTDDVTGHLTNHVTDDVTSL MINHVTDDVTDHMTNHVTNDVTSDMTNHVTNDVTSHMTNHLTDDITGHMTNHVTDDVIGDMTNHVTNDVTSHITNHVTDD VTDHMTNHLTDDVTIDMTNHVTNDVTSHMTNRMTDDVIGHMTNHVTDDVTRPTTPRSHDLCNY |
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