Gene
| Gene Model ID | pfu_aug1.0_6975.1_52857 |
|---|---|
| Locus | scaffold6975.1 : 23591 ... 39775 : - |
| To GenomeBrowser | scaffold6975.1:23591..39775 |
| Genes list of scaffold | scaffold6975.1 |
| Synonym | pfu_aug2.0_1060.1_01352 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6975.1_52857.t1 | 2 | 1 | Helitron_like_N | 177 | 235 | 7.3e-12 | 45.3 | 6.4e-16 | 9.4e-12 | 45.0 |
| pfu_aug1.0_6975.1_52857.t1 | 2 | 2 | Helitron_like_N | 332 | 370 | 7.3e-12 | 45.3 | 0.14 | 2100.0 | -1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6975.1_52857.t1 | gi|345493358|ref|XP_003427051.1| | 3.0e-31 |
Transcript
| Transcript ID | pfu_aug1.0_6975.1_52857.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6975.1_52857.t1 atgaaggcgactactgaccccgtattaactttccaacaaaaagaagagaattttcaactccaaaagtccttcaatgtaca agtatgaatcaacacttggcaagctttcttctttgcaataaaggatcccatgcatacaatggtaacatctttatgtgtgg agcctgtggaaagaactttaaaacaaagcattgtcgaatgcagcaccgatgttttgtttgccagttttgtaaaaaaacgt acaaaattatggtacagagaaagtgttcgttctgcatcaaccattaaagtttcaagtgaactaaaaggaaaagttattac tggtgtgtgtagcatggatgaaaaagagtggatttgccttacatattgtggatatactaaagaagataaacttccaccat gtgcaaaatctaatggagtagaattcccagaaaaacctgatgtattgtttttaaataccatagaggaaaaacttgctgct ttacgaatacctttcatgcagttacatgaattgcctcgcggaaaacaagctgaattacttcgaaatgatcctgtggcatc tgcaagacactttgatcatcaagttcaaattttcatcatcaaagttctaaaaagtgatctcaacccaataggaaaagtag tggaatttttctacaaagtggaatttcaaatgaggggctcgcctcacatacatatgattatttgggcgaaggatgctcct aagctgcaagatggcaatgaatctgaaataactgactttatagatcagtacgttacttgtgctagagatgctgaaataga gaaacttgtggagtatcaacaacgctctcatggaagaacttgtaaaaagcgcaacaaaaatgaatgccgttttaactttc cgcaaccaccaatgacaaatacttgtattttatacccccttgatgaagagatggatataaaggataaacaagctcacaaa gaaaactggattaaggtcaggaaaactttggataagatgaatcaagtcagttacatctccaaagctcaacgagggatgag caatcttctcctcaatgccacaaaggaagcaagggaaggaaatatggatctccaaaaacaagttgaatctattggtgaca aatttcttactcatgtggaagtttccgcacaagaggctgtttatttcattctgcaaatgccattgcggaaatcttccagg gaagttatattcatagatacagcaccagaagaagaaagagtagttttattaaagagttcagaagaaattaaaaatcttcc tgacgattcaaaagacattgcagaatccaacaacataaagcgttacatagaaagaccgccttctgcagaaaatttgttca tcgcagattacacatctttatacagagccactggaacagtctctgaaggcattaaattgaagaaacggcaacatcaagct gtaattcgatgtgttgggtatcatgaagaaaaggattctgagaatttctataggaagtgcttatttttgtatcatccatg gagagtagaaaaagagataattgaaaacaggggaacatacaaagaacgattttatgacattttgaagtgttcaaacatag ctgagaagatggaggaatataatcatacatggaattatctttattatgctttagagaagcttagaaatgctgaagatgat ggtttatttgaagaccaatgggacttacttgcgccgtgtacagaagctttagagaaagaagacgaagaagaggcatccaa aataatgaccgaatcaagaagaaatgaaaatgacattcatgactattctacatcagttttctctgatttaccacaaggtg acacacagcaatgtgatataatcctcaattacatggacgatgataaataccgagagctagtgagataa |
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Protein
| Protein ID | pfu_aug1.0_6975.1_52857.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6975.1_52857.t1 MKATTDPVLTFQQKEENFQLQKSFNVQVXINTWQAFFFAIKDPMHTMVTSLCVEPVERTLKQSIVECSTDVLFASFVKKR TKLWYRESVRSASTIKVSSELKGKVITGVCSMDEKEWICLTYCGYTKEDKLPPCAKSNGVEFPEKPDVLFLNTIEEKLAA LRIPFMQLHELPRGKQAELLRNDPVASARHFDHQVQIFIIKVLKSDLNPIGKVVEFFYKVEFQMRGSPHIHMIIWAKDAP KLQDGNESEITDFIDQYVTCARDAEIEKLVEYQQRSHGRTCKKRNKNECRFNFPQPPMTNTCILYPLDEEMDIKDKQAHK ENWIKVRKTLDKMNQVSYISKAQRGMSNLLLNATKEAREGNMDLQKQVESIGDKFLTHVEVSAQEAVYFILQMPLRKSSR EVIFIDTAPEEERVVLLKSSEEIKNLPDDSKDIAESNNIKRYIERPPSAENLFIADYTSLYRATGTVSEGIKLKKRQHQA VIRCVGYHEEKDSENFYRKCLFLYHPWRVEKEIIENRGTYKERFYDILKCSNIAEKMEEYNHTWNYLYYALEKLRNAEDD GLFEDQWDLLAPCTEALEKEDEEEASKIMTESRRNENDIHDYSTSVFSDLPQGDTQQCDIILNYMDDDKYRELVR |
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