Gene
| Gene Model ID | pfu_aug1.0_7.1_14648 |
|---|---|
| Locus | scaffold7.1 : 277376 ... 282811 : + |
| To GenomeBrowser | scaffold7.1:277376..282811 |
| Genes list of scaffold | scaffold7.1 |
| Synonym | pfu_aug2.0_202.1_07153 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7.1_14648.t1 | 1 | 1 | zf-RING_2 | 15 | 61 | 2.0e-07 | 30.7 | 3.8e-10 | 2.0e-07 | 30.7 |
| pfu_aug1.0_7.1_14648.t1 | 1 | 1 | zf-C3HC4 | 16 | 60 | 1.4e-09 | 37.4 | 2.6e-12 | 1.4e-09 | 37.4 |
| pfu_aug1.0_7.1_14648.t1 | 1 | 1 | zf-C3HC4_2 | 16 | 60 | 4.1e-08 | 33.0 | 7.8e-11 | 4.1e-08 | 33.0 |
| pfu_aug1.0_7.1_14648.t1 | 2 | 1 | zf-RING_5 | 16 | 61 | 1.4e-06 | 27.8 | 2.7e-09 | 1.4e-06 | 27.8 |
| pfu_aug1.0_7.1_14648.t1 | 1 | 1 | zf-RING_UBOX | 16 | 58 | 3.5e-06 | 26.6 | 1.6e-08 | 8.5e-06 | 25.3 |
| pfu_aug1.0_7.1_14648.t1 | 2 | 2 | zf-RING_5 | 101 | 128 | 1.4e-06 | 27.8 | 0.51 | 270.0 | 1.4 |
Transcript
| Transcript ID | pfu_aug1.0_7.1_14648.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7.1_14648.t1 atggcctcgtcgactgaaaaatcgacaaatgtagaccttactacctgttctatttgttttgagacttttaaaactcccaa atattttccgtgtttacacagcttttgtgaaggatgtatacaaacttatattacaaagactttcgtacaatcaaaaggcg gagtaaattgtcccgtgtgtcggatttttgtttccaaaccggaggatatcagcatagaggaatggtcatcaaaactacct acaaaccatattctggttagtcttattgatatgaatcaatcaaattcagatgaaaaattatgtacagcttgttcaaggga aaacgaaaccgaaagtgcttgttcgtggtgtattaactgtactgagttattatgcaaggcatgtgaccgctcgcatcgta gaaacaaatacaccaacacacataaactggttgatctttcaaatcctcaaacgagcgaaataaagttacataaagctgat atacaatgcacagaacatccggataaaaatgtagaagcgtactgtagagatcattccgagatttgttgtatgacatgcgc attcctcaagcacagaaattgtaaaaatgttggatccatacaagatgcagcgcaggagatgaagaaatcaaatgatgtag aaacctttgcagattctctaaacgaatttaagaactctttggatgagatgttacaatacacgacaaaaaacttacaagac ttcgacaaagacatcgaggaaatgaagtcagatgtcgaaacattatttacaaagttatccaatcatctgagtcagttgaa agcacacattatgtctgaaatatcaaagattgagaaagaggtccgaccagagatagaggataaacatgaagaaatcaaat gtaaaatatcgactatagagaatgacttagccctatttcagaccaacatgaagtacgccccgcccgcccagttcctacaa gccatcgaaaaactaatagagcaaaggtctacagacggacatgtaaacatgagctcatctttgacatcagagtttgatat actagtgccatctccggtgacaggaataacagtattggagaacggtcatgttctgctgtccgtatactataagcagacca tagagctccgtgaccaccagtgttccagtatcctatcatcgttttcatttccaggacatccacgtgggatcaagatgacc agtgatatagagggcgctgtagctgtagcaggatgtggactgatcctatttcatatacaaaacaatcggatcaaaccttt aaataaaatcaggacaaacgtaaattgtgactttgtgcatcaccagggtaaatattacatgggatgtgataagaatatcg ccgtatatgatagtactcgccgcaaggtccgtgatatatcagtggataagaacgtgggctacatgacactccgtgaccgc acatcactgtgttatacagtgtggggaggaggtgagttgtattgtataactatggacggtaccccgttgttcacgtactc tcatgacaagctacaggacacggcaggtgtcacaatggatcacaccggctatatttatatatgtggttatgagtctaaga acgtacatcagctgactcatgatgggaagctacagaggattatatttgacaacctaccatctccgccgttctgtgtctgt gttaacaaacataatgacaaagctgtgattggatgcaaagataaggtcctactgtatgaactgaaatag |
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Protein
| Protein ID | pfu_aug1.0_7.1_14648.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7.1_14648.t1 MASSTEKSTNVDLTTCSICFETFKTPKYFPCLHSFCEGCIQTYITKTFVQSKGGVNCPVCRIFVSKPEDISIEEWSSKLP TNHILVSLIDMNQSNSDEKLCTACSRENETESACSWCINCTELLCKACDRSHRRNKYTNTHKLVDLSNPQTSEIKLHKAD IQCTEHPDKNVEAYCRDHSEICCMTCAFLKHRNCKNVGSIQDAAQEMKKSNDVETFADSLNEFKNSLDEMLQYTTKNLQD FDKDIEEMKSDVETLFTKLSNHLSQLKAHIMSEISKIEKEVRPEIEDKHEEIKCKISTIENDLALFQTNMKYAPPAQFLQ AIEKLIEQRSTDGHVNMSSSLTSEFDILVPSPVTGITVLENGHVLLSVYYKQTIELRDHQCSSILSSFSFPGHPRGIKMT SDIEGAVAVAGCGLILFHIQNNRIKPLNKIRTNVNCDFVHHQGKYYMGCDKNIAVYDSTRRKVRDISVDKNVGYMTLRDR TSLCYTVWGGGELYCITMDGTPLFTYSHDKLQDTAGVTMDHTGYIYICGYESKNVHQLTHDGKLQRIIFDNLPSPPFCVC VNKHNDKAVIGCKDKVLLYELK |
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