Gene
| Gene Model ID | pfu_aug1.0_7.1_14677 |
|---|---|
| Locus | scaffold7.1 : 591929 ... 607730 : - |
| To GenomeBrowser | scaffold7.1:591929..607730 |
| Genes list of scaffold | scaffold7.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7.1_14677.t1 | 2 | 1 | L27 | 86 | 113 | 6.5e-16 | 57.7 | 1.5e-06 | 0.0055 | 16.3 |
| pfu_aug1.0_7.1_14677.t1 | 2 | 2 | L27 | 134 | 175 | 6.5e-16 | 57.7 | 1.4e-13 | 5.0e-10 | 38.9 |
| pfu_aug1.0_7.1_14677.t1 | 1 | 1 | SH3_2 | 262 | 320 | 1.8e-06 | 27.3 | 1.0e-09 | 3.9e-06 | 26.2 |
| pfu_aug1.0_7.1_14677.t1 | 1 | 1 | SH3_1 | 277 | 315 | 1.5e-06 | 27.5 | 9.3e-10 | 3.4e-06 | 26.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7.1_14677.t1 | gi|260806275|ref|XP_002598010.1| | hypothetical protein BRAFLDRAFT_265353 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_7.1_14677.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7.1_14677.t1 atgataaaacagcgagaacagatacagagcgaatcaaacgggaggcgaatacggcgtaagaaaaattatttccggtcgct actcgttagttttgcagttcagagtagtttttacactcctttgcaagaaacaaacaaccagaaaaaagaacataaaatgc ctgctgcaagcagtgaacctgaggactcaggattagcttcattagagaaacttaggaatgtattggatgacgtaggggat atagtagatgctgaacatgatgacatcgcgttcctcaaaaagtttctgaaggatcctacgttgaagaaagtcatgaagac tcatgacagacttaaccaaggagatgaccttgaaccatcaacagatgatgctgccgtagaaatggtttccatggcaatcc gcgacctacgacctgtccttgacgagagtgaggacgcacaggagttagaggatattcttacaagtcctcatatgaaggca ttgatggaagcccatgatgatgttgccgacagaaattacggtgacgattatccaccccctaacaagataaaatctccgcc cccaccggtgtttaatgccatctccgatcaagttcggcttgttggaatacgtttgcttcacgtaaacgacatcataaagg aagtgaacggtataccagtatgcactcccgaacacttaatggacgtcatacgttgttccgatggtaacatcactcttaag ataattcctgccattgtagaggagcaccatcattctcagctttacctgaggtcccacatcagttatgacccggccaagga cagactattaccgtgtaaagacgcaggcttaccattcagagacggtgatattttacatgtgttgaacaatgaggacccaa gctggtggcaggcccgtatggtaatgcctgatggtacggacggagatacaggactcatcccatcccagcagctggaagaa aaaagacgggcgtatgtacagccagattacgactactcaaagagcagtttgttatgtggtttgaagaagaggaagcaaaa gaaagtaaaatattccatgaaaaatcacaaagaatgtaggtataatatgtacaggtaa |
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Protein
| Protein ID | pfu_aug1.0_7.1_14677.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7.1_14677.t1 MIKQREQIQSESNGRRIRRKKNYFRSLLVSFAVQSSFYTPLQETNNQKKEHKMPAASSEPEDSGLASLEKLRNVLDDVGD IVDAEHDDIAFLKKFLKDPTLKKVMKTHDRLNQGDDLEPSTDDAAVEMVSMAIRDLRPVLDESEDAQELEDILTSPHMKA LMEAHDDVADRNYGDDYPPPNKIKSPPPPVFNAISDQVRLVGIRLLHVNDIIKEVNGIPVCTPEHLMDVIRCSDGNITLK IIPAIVEEHHHSQLYLRSHISYDPAKDRLLPCKDAGLPFRDGDILHVLNNEDPSWWQARMVMPDGTDGDTGLIPSQQLEE KRRAYVQPDYDYSKSSLLCGLKKRKQKKVKYSMKNHKECRYNMYR |
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