Gene
| Gene Model ID | pfu_aug1.0_7.1_14678 |
|---|---|
| Locus | scaffold7.1 : 609432 ... 618320 : - |
| To GenomeBrowser | scaffold7.1:609432..618320 |
| Genes list of scaffold | scaffold7.1 |
| Synonym | pfu_aug2.0_1921.1_05318 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | Chitinase like protein |
| Description | Chitinase like protein, partial sequence. Hit to BLAST (NCBI, XP_001381990.1). |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7.1_14678.t1 | 1 | 1 | Glyco_hydro_18 | 25 | 373 | 0.0 | 298.8 | 0.0 | 0.0 | 298.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7.1_14678.t1 | gi|126311575|ref|XP_001381990.1| | PREDICTED: acidic mammalian chitinase-like [Monodelphis domestica] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_7.1_14678.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7.1_14678.t1 atggattctctgataaaattcgtaattctagtcagcattacagcggtcgttttaacaaaagccaaagaatttaaaagagt ttgctactttaccaactggtcgcatcaaagacctcacgtaccaactcggtttgaaatcagcaacattgatcccactctgt gtacacacattaactatgcttttgcaaaagttgacaaaagccgcctaactctgtttagaacgaatgttgacgacgacaac ttatcattggacaataagcaaggaagattttttgagtttacatctttgaagaagaaacatccacatttgaagatgatgtt gtctgtgggaggcgagggtacagatgacatcttctctgatatagtcaaatcaaacgaggcaatgaaaacatttgccatga actgcaggatatacctgagtgatcgggattttgatggtctagacgtcgattgggaatatccacgagcgaaaaataaggat ggatttacccatctccttaaggcactctatggggaatttaagaacacatcatacccagatggcaaggagtacttactctc gtttgctgctgccccagggaaggaaactatagaagcttcatataacatcccagaggtcataaagtatgtcgactttatca acgtcatggcttatgattactatggagcatggagtcacgtgacaggatttgacagtggactctacagctacggagatccc aaagcatttgcttataccctctctacaaattggacgatgaataagtacgtggagttaggtgcaccgcccgaaatgttagt catggggctgacaccagtggcagctggttttgaacttgcagatacatctaaacatggtgtgggagaccaggttattaaag gtggtatagcagctggacctgtccttgctatagcgggaaggagaagctatcaggctttatgtctggagctagccgaagga ggcttccatgaaaaatggtatgatcaagcgaaacagacttatgcgtacagaaacacatcatggtttgggtatgaaacaga aaagagcatggaaataaaggtggagtatgccttcaagtcaaacttcggaggagtgatgttttgggcccttgacctggatg atttcaagggagatcactgtaacaggggaccttacccactattgtcgacagttcggaacacgactgtaaaacttacctct ctcaatacaacaccgaaggataacaccgagatacatgatatctcaaatcaatgtgattttctgaatccttcaattctcag tctagctcttctaacttttttacttcattttgttagttag |
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Protein
| Protein ID | pfu_aug1.0_7.1_14678.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7.1_14678.t1 MDSLIKFVILVSITAVVLTKAKEFKRVCYFTNWSHQRPHVPTRFEISNIDPTLCTHINYAFAKVDKSRLTLFRTNVDDDN LSLDNKQGRFFEFTSLKKKHPHLKMMLSVGGEGTDDIFSDIVKSNEAMKTFAMNCRIYLSDRDFDGLDVDWEYPRAKNKD GFTHLLKALYGEFKNTSYPDGKEYLLSFAAAPGKETIEASYNIPEVIKYVDFINVMAYDYYGAWSHVTGFDSGLYSYGDP KAFAYTLSTNWTMNKYVELGAPPEMLVMGLTPVAAGFELADTSKHGVGDQVIKGGIAAGPVLAIAGRRSYQALCLELAEG GFHEKWYDQAKQTYAYRNTSWFGYETEKSMEIKVEYAFKSNFGGVMFWALDLDDFKGDHCNRGPYPLLSTVRNTTVKLTS LNTTPKDNTEIHDISNQCDFLNPSILSLALLTFLLHFVS |
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