Gene
| Gene Model ID | pfu_aug1.0_7.1_14680 |
|---|---|
| Locus | scaffold7.1 : 636521 ... 643794 : + |
| To GenomeBrowser | scaffold7.1:636521..643794 |
| Genes list of scaffold | scaffold7.1 |
| Synonym | pfu_aug2.0_1921.1_05319 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7.1_14680.t1 | 1 | 1 | Neur_chan_LBD | 72 | 277 | 5.1e-38 | 130.4 | 9.30042e-42 | 6.9e-38 | 129.9 |
| pfu_aug1.0_7.1_14680.t1 | 2 | 1 | Neur_chan_memb | 286 | 392 | 1.2e-13 | 51.5 | 1.8e-17 | 1.3e-13 | 51.3 |
| pfu_aug1.0_7.1_14680.t1 | 2 | 2 | Neur_chan_memb | 425 | 448 | 1.2e-13 | 51.5 | 0.65 | 4800.0 | -2.9 |
Transcript
| Transcript ID | pfu_aug1.0_7.1_14680.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7.1_14680.t1 atgcaacacccgtcgcaacagctccatcgaaattataacctgtcaaattcggtgattgtctcgatgtacattttgatgta cacatcagataataatatcttgtttggtgatgtctattttaagacttttgttgtacttgtctaccatgtgtttttatgct ttgctatatgtggtgcaaccgaatctgcttcgcaaacacaggatgatatcgataaactaagagctgatctcctaagaaat tattcgaagttttccagagggaatcacaatcagtcagcttcaacaatactggatccggaattcaccctcgtaaatataaa cgaattcgatgaaataacggggacattcactgccgttggattttttcgagtgttttggacggatgacagattggtttgga atgcatccgattatggaggcatcgacagaattttatttttcgaaacacatgtgtggacgccgaatattgtcattgcaaat tcaaacggaaatgaggagagtaacattcttggacatgagcgagtaccagtggttgctttgtcaaatggtactgttatttg gctacctggtaaacattttaaaacattctgcagtccgaatgtacagaaatttccctacgataatcagatttgtgaattct ggtttgtcccatggggtttctcatctaaagatgtgatattcagcccaagtacacagaatgtcaaccttaatctttattct aacaatagtgtttgggagatgatcgacacatacttggtggcatctacccagaatccggataacaacttcgaattccagat gctgaaaatctacttccacctgaagcggcgggcaacattttatgtcatcaacatggtattacccatagtggtgatgggat ttctgaatctacttgtattcctattgccacctcaatcaggtgaaagagtgggatactcaataacagttcttctggccatc agcgtctttctgacaatagcctctgataacttaccgagaaattcctaccctgctgtgtcttcattgtgtatcaagctgct catggattttatcataagtagtatggtggtcctcttcaccatccttgggctacgattctacaacaagggtaaggacaaac cagtcccaagcttcatcgaaaaactggcgcgaataattctttgcaaatgtagacagagaaaggtagctgatggaaacgac gatgtaaaatattgtaatgaagtaagagaattcaaggaaaatgacaatgaaatcatcctgcattgctctgataccgagaa attcacatgggaggacgttggaaaagcttcagatatcgtgttcttttttatatgtttgcttggtttcattggctcacatc taacgttttacatgtacgtttacgtgtag |
|
Protein
| Protein ID | pfu_aug1.0_7.1_14680.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7.1_14680.t1 MQHPSQQLHRNYNLSNSVIVSMYILMYTSDNNILFGDVYFKTFVVLVYHVFLCFAICGATESASQTQDDIDKLRADLLRN YSKFSRGNHNQSASTILDPEFTLVNINEFDEITGTFTAVGFFRVFWTDDRLVWNASDYGGIDRILFFETHVWTPNIVIAN SNGNEESNILGHERVPVVALSNGTVIWLPGKHFKTFCSPNVQKFPYDNQICEFWFVPWGFSSKDVIFSPSTQNVNLNLYS NNSVWEMIDTYLVASTQNPDNNFEFQMLKIYFHLKRRATFYVINMVLPIVVMGFLNLLVFLLPPQSGERVGYSITVLLAI SVFLTIASDNLPRNSYPAVSSLCIKLLMDFIISSMVVLFTILGLRFYNKGKDKPVPSFIEKLARIILCKCRQRKVADGND DVKYCNEVREFKENDNEIILHCSDTEKFTWEDVGKASDIVFFFICLLGFIGSHLTFYMYVYV |
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