Gene
| Gene Model ID | pfu_aug1.0_7005.1_45553 |
|---|---|
| Locus | scaffold7005.1 : 5789 ... 11225 : - |
| To GenomeBrowser | scaffold7005.1:5789..11225 |
| Genes list of scaffold | scaffold7005.1 |
| Synonym | pfu_aug2.0_1492.1_08403 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7005.1_45553.t1 | 2 | 1 | SRCR | 21 | 95 | 3.2e-16 | 59.4 | 2.9e-11 | 4.3e-07 | 30.1 |
| pfu_aug1.0_7005.1_45553.t1 | 2 | 2 | SRCR | 116 | 184 | 3.2e-16 | 59.4 | 2.1e-10 | 3.2e-06 | 27.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7005.1_45553.t1 | gi|196016051|ref|XP_002117880.1| | hypothetical protein TRIADDRAFT_61895 [Trichoplax adhaerens] | 7.0e-11 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_7005.1_45553.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7005.1_45553.t1 atgtttaattctgtgctctattaggaaagtcggagaattcggctatctggatatggccgaaatgataaaggtcgcgtgga acttatgcttaatggaagttggatactaattaatccttactggctacagtcccctgaggctaacatgttctgtaaaatgt tgggatacagacatggtggcgaacctattttgaaggagaaagtcccaccaactgttgggactgtcttaattgagtttata acttgtccttacgatgctgttacaataagtaattgctcagtgaagtacagatcaggagccaaaatgtccgttccaacaat accatttcgaaaaagaaggaattttgagggagtgaagagactgcagtattataaagatggtttatgggggacagtgtgcg gtgcctatattggttatccggaagccaatatgatttgctccatgatgggattcaagcatggtggaaaattggtcatgaaa tataagaaaaaatggtcttaccgaggacttggaccaattattttaaagtacctggactgtccaataaatgccacnagata tctctcagtgtccgttcagaaattacacttcgcacgaccatcgatcgagatgctatttatacagtga |
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Protein
| Protein ID | pfu_aug1.0_7005.1_45553.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7005.1_45553.t1 MFNSVLYXESRRIRLSGYGRNDKGRVELMLNGSWILINPYWLQSPEANMFCKMLGYRHGGEPILKEKVPPTVGTVLIEFI TCPYDAVTISNCSVKYRSGAKMSVPTIPFRKRRNFEGVKRLQYYKDGLWGTVCGAYIGYPEANMICSMMGFKHGGKLVMK YKKKWSYRGLGPIILKYLDCPINAXRYLSVSVQKLHFARPSIEMLFIQ |
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