Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_70112.1_27643
Locus scaffold70112.1 : 38 ... 3637 : +
To GenomeBrowser scaffold70112.1:38..3637
Genes list of scaffold scaffold70112.1
Synonym pfu_aug2.0_510.1_00833

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_70112.1_27643.t1 1 1 14-3-3 4 237 0.0 346.0 0.0 0.0 345.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_70112.1_27643.t1 gi|326507178|dbj|BAJ95666.1| predicted protein [Hordeum vulgare subsp. vulgare] 0.0

Transcript
Transcript IDpfu_aug1.0_70112.1_27643.t1
Definition-
>pfu_aug1.0_70112.1_27643.t1
atgagcaacagggaggaactggttcagtatgctaagatagcagaacaagccgaacgatttgaagatatgacagatagtat
gaaaacgatcgtagatttgcttgagaatgaagaagaactgacaacggaagagagaaacctgctgtctgtcgccttcaaaa
acgtggtgggggcaagacgatcgtcctggcgaatgatatctatgatagaaagcaaatctgagggaaccaagctggcccta
gcaaaacggttcagagaaaaggtggaaaaggagctcgagagcatctgtgatgatgtcctaaatctcttggatgagaagtt
gataaaacgatcaaaaagtccagatagctctgtattcttcctcaagatgaagggtgattatcaccgctacaaggccgagt
ttgccaaagatgattctcgtaaaggtgtaattgaagattcaaacaaagcgtattcagaagcgtatgaaatcgcaaaagga
aacatgccggcgacccacccaaatagacttggattggcacttaatttttctgtattctactatgagataatgaattcacc
agatcgcgcttgtcatttagcaaaacaagcattcgatgatgcaatatctgaacttgataaactggactctgaaagctaca
aagatagcaccttaataatgcagttactacgagataatttaacgctatggacttccgatactcaacaagatggtcaagaa
aacgaacaagaagtagaagagggcaattga

Protein
Protein IDpfu_aug1.0_70112.1_27643.t1
Definition-
>pfu_aug1.0_70112.1_27643.t1
MSNREELVQYAKIAEQAERFEDMTDSMKTIVDLLENEEELTTEERNLLSVAFKNVVGARRSSWRMISMIESKSEGTKLAL
AKRFREKVEKELESICDDVLNLLDEKLIKRSKSPDSSVFFLKMKGDYHRYKAEFAKDDSRKGVIEDSNKAYSEAYEIAKG
NMPATHPNRLGLALNFSVFYYEIMNSPDRACHLAKQAFDDAISELDKLDSESYKDSTLIMQLLRDNLTLWTSDTQQDGQE
NEQEVEEGN

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495