Gene
| Gene Model ID | pfu_aug1.0_7025.1_09474 |
|---|---|
| Locus | scaffold7025.1 : 16966 ... 25165 : - |
| To GenomeBrowser | scaffold7025.1:16966..25165 |
| Genes list of scaffold | scaffold7025.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7025.1_09474.t1 | 1 | 1 | Mod_r | 32 | 179 | 7.4e-32 | 110.3 | 1.2e-35 | 8.8e-32 | 110.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7025.1_09474.t1 | gi|241111850|ref|XP_002399406.1| | vacuolar protein-sorting protein, putative [Ixodes scapularis] | 2.0e-33 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7025.1_09474.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7025.1_09474.t1 atgtatagcagtttccgtgaaagttccgataactttacaaactccacacagctaccacctcctgatgaagatgctgctgt tggtctggtacaacatctgaataaagaagagcttcagaacttacttgacaataatgacaagctggaggaattactgaatg atctacaacaggtcaaaagtctacagacaaacagggaaatgatgctggcacaaaacaaaagtatggcagatttcagttta tccctacaaccaaggcttgatgaactgaagcgagaagttgggacagcttatgaagaggctaataccttgaaagtaaagtt agcgacagacaagtctaaactggatgataaaatgcagtgtcagtctctggacactgtacttgcgttattacagacagaga ctgctgcttcagaagaacttacagagcaacttgctgacaaattctgtgataatgaaataaacttggaaaacttcttggaa aattatattccacagagaaaggcggcacatttacgccaaatcaaagtgcaaaagttaacagagttagtaagaaatccttc ccgagcccaggcaggtggagggtatgtgaatggtccgaccagcactccctaccctgccaatatgtccatgccacagccgt ttggatacggaaatagataa |
|
Protein
| Protein ID | pfu_aug1.0_7025.1_09474.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7025.1_09474.t1 MYSSFRESSDNFTNSTQLPPPDEDAAVGLVQHLNKEELQNLLDNNDKLEELLNDLQQVKSLQTNREMMLAQNKSMADFSL SLQPRLDELKREVGTAYEEANTLKVKLATDKSKLDDKMQCQSLDTVLALLQTETAASEELTEQLADKFCDNEINLENFLE NYIPQRKAAHLRQIKVQKLTELVRNPSRAQAGGGYVNGPTSTPYPANMSMPQPFGYGNR |
|