Gene
| Gene Model ID | pfu_aug1.0_704.1_65585 |
|---|---|
| Locus | scaffold704.1 : 22806 ... 34390 : + |
| To GenomeBrowser | scaffold704.1:22806..34390 |
| Genes list of scaffold | scaffold704.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_704.1_65585.t1 | 1 | 1 | Tetraspannin | 9 | 129 | 1.0e-22 | 80.4 | 1.6e-26 | 1.2e-22 | 80.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_704.1_65585.t1 | gi|89511738|emb|CAJ28140.1| | CD9 antigen [Dasyatis akajei] | 2.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_704.1_65585.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_704.1_65585.t1 atgggactgtcctgtggccaaaattgcttaaagtacatactgtttgcaacaaatctactattctttctctttggttgcgc atgcgttgccatcggtgtctgggccttattggacgaaagcaagttgcttgtatttactgagattggtaaccctggtgaat atgacgtcatctcgctcgtcactacagctgcctatatcttcattgccagcggtgcctttgcagtcattgttggatttttc ggatgttgcggagccgtaaaggaaaacaactgcctgctaatcacttactcggctttggtgctactgacactggtcatgca agtggctgtagtggtcatctccatcctgttccatggaaaggttactgcagattttaaattcgccagcatgcgttacgctg tgttatggcgtattcattgctgtgctatggagtattcatttcacaactaa |
|
Protein
| Protein ID | pfu_aug1.0_704.1_65585.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_704.1_65585.t1 MGLSCGQNCLKYILFATNLLFFLFGCACVAIGVWALLDESKLLVFTEIGNPGEYDVISLVTTAAYIFIASGAFAVIVGFF GCCGAVKENNCLLITYSALVLLTLVMQVAVVVISILFHGKVTADFKFASMRYAVLWRIHCCAMEYSFHN |
|