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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7052.1_60183
Locus scaffold7052.1 : 503 ... 8365 : -
To GenomeBrowser scaffold7052.1:503..8365
Genes list of scaffold scaffold7052.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7052.1_60183.t1 1 1 Laminin_G_3 113 262 8.1e-14 52.1 7.5e-18 1.1e-13 51.7

Transcript
Transcript IDpfu_aug1.0_7052.1_60183.t1
Definition-
>pfu_aug1.0_7052.1_60183.t1
atggggaccaattgtgccccacttcttgccgacattttcctttactcgtacgaagctgaattcattcaatctttggtctc
tgaagggaaaagaaccatggccagtagaaggaaaattaatgtagcgaaaattatctacgctatgttaggccttctccact
ccacaaaatctgaggtgaagcctgcgattcagtggcctttagtggatatttccggtcttgccgatgttataaatggcaca
tacaatctgaaagcagacggcgagaaacaatgttttcatttcggtgaaacatttgaagagcttggatacgacgcattaaa
acttggcgcatcatcagcgcagtatctcacgtgtcctttgacaaaatttaaggacttaacagtatcattccttatataca
ctgacagtgatcctgtgggcacgttccttcattacacgatcggagagaaggaatttttccgcgttatgtttcacccaatg
gcacctataacatttgtatctttccgcgatcagtacgataaccctgcaggtataattactattcaaaatctgttgacctt
gaaaaactggaatcacgtggttattcagcggaagtacgatgacggtcacttgagagtttattccaacgggattttggttg
cagacaaggatgaaatggaccaaataggcttaccgccagatggcacttttgccattggtaatagtctgagtgacctcagt
cagcaatttactggatatatttcatgcttgcaaattttcgccaaatttctgagcgaagctgaaatggaggaggtatggaa
gctctgcaagagggaacgatggaaaactaaaccaaaagtttacgtaatagaggacactgactcggacaaaaagtgtttga
cggatgttccccctccacctncctttcgccccttcacatatagacgaaagccctccgacgtcaacttccgataa

Protein
Protein IDpfu_aug1.0_7052.1_60183.t1
Definition-
>pfu_aug1.0_7052.1_60183.t1
MGTNCAPLLADIFLYSYEAEFIQSLVSEGKRTMASRRKINVAKIIYAMLGLLHSTKSEVKPAIQWPLVDISGLADVINGT
YNLKADGEKQCFHFGETFEELGYDALKLGASSAQYLTCPLTKFKDLTVSFLIYTDSDPVGTFLHYTIGEKEFFRVMFHPM
APITFVSFRDQYDNPAGIITIQNLLTLKNWNHVVIQRKYDDGHLRVYSNGILVADKDEMDQIGLPPDGTFAIGNSLSDLS
QQFTGYISCLQIFAKFLSEAEMEEVWKLCKRERWKTKPKVYVIEDTDSDKKCLTDVPPPPXFRPFTYRRKPSDVNFR

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