Gene
| Gene Model ID | pfu_aug1.0_70607.1_20440 |
|---|---|
| Locus | scaffold70607.1 : 796 ... 3437 : + |
| To GenomeBrowser | scaffold70607.1:796..3437 |
| Genes list of scaffold | scaffold70607.1 |
| Synonym | pfu_aug2.0_1263.1_11550 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_70607.1_20440.t1 | 1 | 1 | Pro_isomerase | 40 | 123 | 2.2e-24 | 86.4 | 1.6e-28 | 2.4e-24 | 86.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_70607.1_20440.t1 | gi|163637061|gb|ABY27347.1| | peptidylprolyl isomerase protein [Crassostrea gigas] | 1.99993e-41 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
| mantleEdge | 2 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_70607.1_20440.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_70607.1_20440.t1 atggatcaagacattgaacatcttaagtcttttcaacgtgtacggagatggagcatatcgagcgatttttcaccagattg cgcgaatctgattggtcgaggtgaaagtatcttcggccaaacctttgtcgacgagaaccatatcatcagccacaaagctg cagggtacgtttcaatggccaaccacggacctgacagtaatggttcacaattcttcataacgttgaacaaagcaagatgg ctggatggaaaacatgttgcttttggaaaggtcattaatggaatggatttaattaggaagattggcgaagtaccagcaaa caaaaatactgctgtgccaaagaaatcaataaagattatagactgtggactgagcagtctaccaaaggaatacgaccttt cagaagatcaatcgaactctgatgacgacatctaa |
|
Protein
| Protein ID | pfu_aug1.0_70607.1_20440.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_70607.1_20440.t1 MDQDIEHLKSFQRVRRWSISSDFSPDCANLIGRGESIFGQTFVDENHIISHKAAGYVSMANHGPDSNGSQFFITLNKARW LDGKHVAFGKVINGMDLIRKIGEVPANKNTAVPKKSIKIIDCGLSSLPKEYDLSEDQSNSDDDI |
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