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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7062.1_60186
Locus scaffold7062.1 : 6536 ... 24528 : -
To GenomeBrowser scaffold7062.1:6536..24528
Genes list of scaffold scaffold7062.1
Synonym pfu_aug2.0_8271.1_06334

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7062.1_60186.t1 1 1 Sulfatase 13 170 3.7e-28 98.6 1.4e-31 5.4e-28 98.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_7062.1_60186.t1
Definition-
>pfu_aug1.0_7062.1_60186.t1
tgaatggtaaagatttcagagatgacaagaaagccattgagtctaatggagaatactcagcacacctttttgcaaagcgg
gctcagcagataatatatgatcataatgctacacaaccgatgttcctatacctaccgtttcaatcagtccaccaaccaat
tcaggtaccaaagaagtatgaagacatgtacagccatataaagaatgatggaagacgcatgtatagtggtatggtgacag
ctatggatgaagctataggaaacgtcacacaagctcttaaagatagagacatgtttaccgatactcttattttgttcact
tctgacaatggaggatttcctaagtattccggaaataattacccattacgtggttctaagactacagtctttgaaggcgg
caccagggcagcttctttcattactggagctggcatagatgcaaagaatgaaacctataatggaatgttacacgccgtag
attggatgccgacattggtagctgctgccggaggtagtatctccaatgccgatatggatggcatggaccagtggactaac
atacagacacgtacaccatctaaacgtactggatttgtttacaatctggatgatacgaatcctcctgtgaatggacatgc
cgctataagaaatggaaaatacaaactaattcaaggcttcccaggtcaatatccaggctggtataaaccagatactgtga
aaggaaaccaagacatagaagaagtacgatatgactgttgcgataaaaagacttgggaagcacaaaatatgctgtttgac
ttagaggctgatccaaatgaatacaacgacttgtcggcaaagtatccntcaatgacatga

Protein
Protein IDpfu_aug1.0_7062.1_60186.t1
Definition-
>pfu_aug1.0_7062.1_60186.t1
NGKDFRDDKKAIESNGEYSAHLFAKRAQQIIYDHNATQPMFLYLPFQSVHQPIQVPKKYEDMYSHIKNDGRRMYSGMVTA
MDEAIGNVTQALKDRDMFTDTLILFTSDNGGFPKYSGNNYPLRGSKTTVFEGGTRAASFITGAGIDAKNETYNGMLHAVD
WMPTLVAAAGGSISNADMDGMDQWTNIQTRTPSKRTGFVYNLDDTNPPVNGHAAIRNGKYKLIQGFPGQYPGWYKPDTVK
GNQDIEEVRYDCCDKKTWEAQNMLFDLEADPNEYNDLSAKYXSMT

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