Gene
| Gene Model ID | pfu_aug1.0_7068.1_67613 |
|---|---|
| Locus | scaffold7068.1 : 11246 ... 19626 : + |
| To GenomeBrowser | scaffold7068.1:11246..19626 |
| Genes list of scaffold | scaffold7068.1 |
| Synonym | pfu_aug2.0_735.1_17784 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7068.1_67613.t1 | 1 | 1 | DUF2723 | 60 | 221 | 2.7e-37 | 127.9 | 7.80005e-41 | 3.9e-37 | 127.4 |
| pfu_aug1.0_7068.1_67613.t1 | 1 | 1 | PMT_2 | 75 | 217 | 2.4e-09 | 37.3 | 7.1e-13 | 3.5e-09 | 36.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7068.1_67613.t1 | gi|301608404|ref|XP_002933788.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7068.1_67613.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7068.1_67613.t1 atggacccgaaattcgccacacccctgcaaaaatatgcaaccctgaggagaaactttattcaagctattcgaggatggta tcaacaacagagcagcatttcatttttagcatcaggtcttggtataacaacatttgccatctatgtagctacagcatatc catctgtaccaggaggggattcaggtgaattgatagtagcagctcatgagctgggggtagcccatcccccaggctatcct ttgtttaccttgttgtcatgggttacgatgaagctcctcccccttggcagtctggcatggagggtgaacgtcctgaatgc agcattctccgcaatggcagtatctctgatggtgttactagtcacgagactgacagggcgtatatcagcagctttgctag ccgtaggaacctggggtttctgtaaactaacgtggacatggtcgatcacggcagaagtgtttggcctcaacaacttcttc acttgtctccttttactagttacacattattatcatgtcgaggagagtgaagataagaaacggaagctgtctatattagg atcctttctgtgtggtttatccctctgtaatcaacacacccttgtgatctacgtggcctgtatagccttgtttgtattag tcaatcaacatcagtcacaggtaagtcaacatcagtcacaagtaggtcaacatcagtcatag |
|
Protein
| Protein ID | pfu_aug1.0_7068.1_67613.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7068.1_67613.t1 MDPKFATPLQKYATLRRNFIQAIRGWYQQQSSISFLASGLGITTFAIYVATAYPSVPGGDSGELIVAAHELGVAHPPGYP LFTLLSWVTMKLLPLGSLAWRVNVLNAAFSAMAVSLMVLLVTRLTGRISAALLAVGTWGFCKLTWTWSITAEVFGLNNFF TCLLLLVTHYYHVEESEDKKRKLSILGSFLCGLSLCNQHTLVIYVACIALFVLVNQHQSQVSQHQSQVGQHQS |
|