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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7069.1_02374
Locus scaffold7069.1 : 16186 ... 25830 : -
To GenomeBrowser scaffold7069.1:16186..25830
Genes list of scaffold scaffold7069.1
Synonym pfu_aug2.0_377.1_23940

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7069.1_02374.t1 1 1 DDE_Tnp_4 249 338 2.1e-11 43.6 2.2e-15 3.3e-11 43.0

Transcript
Transcript IDpfu_aug1.0_7069.1_02374.t1
Definition-
>pfu_aug1.0_7069.1_02374.t1
gtagaaagattgccgctgaaaatattaatttattcattttacaacctcctgataaaagatgttaaagctatgggtttaga
aggcgcagttgaagacgacgatactcaatcagcagagaagcaaaagctacgagtaataggtacgaatatcaatcacatga
aatgaaaggatgatccgaaaaaagtatgtaactatcgtccaattgcactattatcgatattaagtaaggatatcaaacaa
attccattttattgtgaaatggcgcttgactcaagaaccctcgctgcaatttctggcgacgacgaccttcttctgctttc
acttatgcataatgatgagaaacatcaaccaattctttacttacaagataatttttatagtcagtataaacaattatttc
ggtttgatagaccagggctgttacatgtggaaatacaatctgcaatgggctttcccgagttcatgagctgtccaaataga
acgaaatttaacagtatggaaggtctccatgtgcttatcagaagactttcgtatcccaacagactagaggatctttcttt
gttgtttggtagaacgaagtttgagttgtcaaacattttcaacactactcttgattttatttatgagaagtacgagcttc
ttcttcttaccctgaacagaccctggttatcacctgcttatcttgatgccatgaaaactgctgtgtcagataagggtagt
cctttggataactgctggggcttcattgatggtaccatacgccctatatgtagaccaaaacagagccagagggtagtcta
cagcggacacaaacgtgtacatgggctcaagtttcagagtataatggcgccgaatgggatgattgcacttttctatggac
caattgaggggagacgtcatgatgccggtatgttacgagaaagtggggtcgagacggaaatgcaacatatgatgaatagg
ccaaacaatgatgtattttgtgtatatggggaccccgcgtaccctttaacaccaagctcgtttcaataa

Protein
Protein IDpfu_aug1.0_7069.1_02374.t1
Definition-
>pfu_aug1.0_7069.1_02374.t1
VERLPLKILIYSFYNLLIKDVKAMGLEGAVEDDDTQSAEKQKLRVIGTNINHMKXKDDPKKVCNYRPIALLSILSKDIKQ
IPFYCEMALDSRTLAAISGDDDLLLLSLMHNDEKHQPILYLQDNFYSQYKQLFRFDRPGLLHVEIQSAMGFPEFMSCPNR
TKFNSMEGLHVLIRRLSYPNRLEDLSLLFGRTKFELSNIFNTTLDFIYEKYELLLLTLNRPWLSPAYLDAMKTAVSDKGS
PLDNCWGFIDGTIRPICRPKQSQRVVYSGHKRVHGLKFQSIMAPNGMIALFYGPIEGRRHDAGMLRESGVETEMQHMMNR
PNNDVFCVYGDPAYPLTPSSFQ

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